Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.7■□□□□ 0.58
NIPAL3Q6P499 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NIPAL3Q6P499 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NIPAL3Q6P499 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.7■□□□□ 0.58
NIPAL3Q6P499 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.7■□□□□ 0.58
NIPAL3Q6P499 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.7■□□□□ 0.58
NIPAL3Q6P499 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
NIPAL3Q6P499 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
NIPAL3Q6P499 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NIPAL3Q6P499 AC027702.1-201ENST00000563810 1770 ntBASIC18.7■□□□□ 0.58
NIPAL3Q6P499 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.7■□□□□ 0.58
NIPAL3Q6P499 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NIPAL3Q6P499 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NIPAL3Q6P499 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NIPAL3Q6P499 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NIPAL3Q6P499 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NIPAL3Q6P499 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NIPAL3Q6P499 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
NIPAL3Q6P499 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.69■□□□□ 0.58
NIPAL3Q6P499 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NIPAL3Q6P499 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.69■□□□□ 0.58
NIPAL3Q6P499 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NIPAL3Q6P499 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NIPAL3Q6P499 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.69■□□□□ 0.58
NIPAL3Q6P499 AC138907.5-202ENST00000569484 235 ntBASIC18.69■□□□□ 0.58
NIPAL3Q6P499 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
NIPAL3Q6P499 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NIPAL3Q6P499 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.69■□□□□ 0.58
NIPAL3Q6P499 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.69■□□□□ 0.58
NIPAL3Q6P499 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.69■□□□□ 0.58
NIPAL3Q6P499 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
NIPAL3Q6P499 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NIPAL3Q6P499 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NIPAL3Q6P499 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NIPAL3Q6P499 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
NIPAL3Q6P499 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NIPAL3Q6P499 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NIPAL3Q6P499 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.69■□□□□ 0.58
NIPAL3Q6P499 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NIPAL3Q6P499 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NIPAL3Q6P499 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NIPAL3Q6P499 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NIPAL3Q6P499 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.68■□□□□ 0.58
NIPAL3Q6P499 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
NIPAL3Q6P499 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
NIPAL3Q6P499 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
NIPAL3Q6P499 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.68■□□□□ 0.58
NIPAL3Q6P499 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NIPAL3Q6P499 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.68■□□□□ 0.58
NIPAL3Q6P499 KRT19P1-201ENST00000405746 1186 ntBASIC18.68■□□□□ 0.58
NIPAL3Q6P499 KRT18P5-201ENST00000436075 1291 ntBASIC18.68■□□□□ 0.58
NIPAL3Q6P499 AC008175.2-201ENST00000612840 297 ntBASIC18.68■□□□□ 0.58
NIPAL3Q6P499 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NIPAL3Q6P499 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NIPAL3Q6P499 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NIPAL3Q6P499 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NIPAL3Q6P499 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.68■□□□□ 0.58
NIPAL3Q6P499 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NIPAL3Q6P499 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NIPAL3Q6P499 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NIPAL3Q6P499 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NIPAL3Q6P499 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NIPAL3Q6P499 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.67■□□□□ 0.58
NIPAL3Q6P499 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NIPAL3Q6P499 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.67■□□□□ 0.58
NIPAL3Q6P499 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.67■□□□□ 0.58
NIPAL3Q6P499 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
NIPAL3Q6P499 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.67■□□□□ 0.58
NIPAL3Q6P499 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NIPAL3Q6P499 AP001160.3-201ENST00000601484 763 ntBASIC18.67■□□□□ 0.58
NIPAL3Q6P499 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
NIPAL3Q6P499 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NIPAL3Q6P499 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
NIPAL3Q6P499 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.67■□□□□ 0.58
NIPAL3Q6P499 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NIPAL3Q6P499 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
NIPAL3Q6P499 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NIPAL3Q6P499 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
NIPAL3Q6P499 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NIPAL3Q6P499 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
NIPAL3Q6P499 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
NIPAL3Q6P499 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NIPAL3Q6P499 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NIPAL3Q6P499 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NIPAL3Q6P499 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NIPAL3Q6P499 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NIPAL3Q6P499 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NIPAL3Q6P499 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NIPAL3Q6P499 AC007225.1-201ENST00000566331 1836 ntBASIC18.66■□□□□ 0.58
NIPAL3Q6P499 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
NIPAL3Q6P499 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NIPAL3Q6P499 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NIPAL3Q6P499 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.66■□□□□ 0.58
NIPAL3Q6P499 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.66■□□□□ 0.58
NIPAL3Q6P499 AC010141.2-201ENST00000452426 721 ntBASIC18.66■□□□□ 0.58
NIPAL3Q6P499 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NIPAL3Q6P499 AL162430.1-201ENST00000480705 870 ntBASIC18.66■□□□□ 0.58
NIPAL3Q6P499 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NIPAL3Q6P499 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.66■□□□□ 0.58
NIPAL3Q6P499 KRT18P61-201ENST00000585825 1298 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms