Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
TTC39BQ5VTQ0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.41■■□□□ 1.02
TTC39BQ5VTQ0 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TTC39BQ5VTQ0 AC133552.2-202ENST00000575694 574 ntBASIC21.41■■□□□ 1.02
TTC39BQ5VTQ0 AC069236.1-201ENST00000604339 616 ntBASIC21.41■■□□□ 1.02
TTC39BQ5VTQ0 AL050303.2-201ENST00000619798 666 ntBASIC21.41■■□□□ 1.02
TTC39BQ5VTQ0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.41■■□□□ 1.02
TTC39BQ5VTQ0 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TTC39BQ5VTQ0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.41■■□□□ 1.02
TTC39BQ5VTQ0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TTC39BQ5VTQ0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TTC39BQ5VTQ0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
TTC39BQ5VTQ0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
TTC39BQ5VTQ0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
TTC39BQ5VTQ0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TTC39BQ5VTQ0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TTC39BQ5VTQ0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.4■■□□□ 1.02
TTC39BQ5VTQ0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TTC39BQ5VTQ0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TTC39BQ5VTQ0 AC091799.1-201ENST00000422823 811 ntBASIC21.4■■□□□ 1.02
TTC39BQ5VTQ0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.4■■□□□ 1.02
TTC39BQ5VTQ0 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TTC39BQ5VTQ0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.4■■□□□ 1.02
TTC39BQ5VTQ0 AL121832.2-201ENST00000610979 668 ntBASIC21.4■■□□□ 1.02
TTC39BQ5VTQ0 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.4■■□□□ 1.02
TTC39BQ5VTQ0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.4■■□□□ 1.02
TTC39BQ5VTQ0 AC008694.1-202ENST00000636953 945 ntBASIC21.4■■□□□ 1.02
TTC39BQ5VTQ0 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TTC39BQ5VTQ0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.4■■□□□ 1.02
TTC39BQ5VTQ0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TTC39BQ5VTQ0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.4■■□□□ 1.02
TTC39BQ5VTQ0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TTC39BQ5VTQ0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.4■■□□□ 1.02
TTC39BQ5VTQ0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TTC39BQ5VTQ0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
TTC39BQ5VTQ0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
TTC39BQ5VTQ0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TTC39BQ5VTQ0 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
TTC39BQ5VTQ0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
TTC39BQ5VTQ0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TTC39BQ5VTQ0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.39■■□□□ 1.01
TTC39BQ5VTQ0 OR10C1-204ENST00000622521 1039 ntBASIC21.39■■□□□ 1.01
TTC39BQ5VTQ0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TTC39BQ5VTQ0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TTC39BQ5VTQ0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.39■■□□□ 1.01
TTC39BQ5VTQ0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.39■■□□□ 1.01
TTC39BQ5VTQ0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TTC39BQ5VTQ0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TTC39BQ5VTQ0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TTC39BQ5VTQ0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TTC39BQ5VTQ0 GPX1P1-201ENST00000388829 606 ntBASIC21.38■■□□□ 1.01
TTC39BQ5VTQ0 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.38■■□□□ 1.01
TTC39BQ5VTQ0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TTC39BQ5VTQ0 CDV3P1-201ENST00000471403 739 ntBASIC21.38■■□□□ 1.01
TTC39BQ5VTQ0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.38■■□□□ 1.01
TTC39BQ5VTQ0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.38■■□□□ 1.01
TTC39BQ5VTQ0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TTC39BQ5VTQ0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.38■■□□□ 1.01
TTC39BQ5VTQ0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.38■■□□□ 1.01
TTC39BQ5VTQ0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TTC39BQ5VTQ0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.38■■□□□ 1.01
TTC39BQ5VTQ0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TTC39BQ5VTQ0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
TTC39BQ5VTQ0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TTC39BQ5VTQ0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TTC39BQ5VTQ0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.37■■□□□ 1.01
TTC39BQ5VTQ0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TTC39BQ5VTQ0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.37■■□□□ 1.01
TTC39BQ5VTQ0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.37■■□□□ 1.01
TTC39BQ5VTQ0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TTC39BQ5VTQ0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TTC39BQ5VTQ0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.37■■□□□ 1.01
TTC39BQ5VTQ0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TTC39BQ5VTQ0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
TTC39BQ5VTQ0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
TTC39BQ5VTQ0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TTC39BQ5VTQ0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
TTC39BQ5VTQ0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TTC39BQ5VTQ0 AL157384.1-201ENST00000445995 2473 ntBASIC21.36■■□□□ 1.01
TTC39BQ5VTQ0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TTC39BQ5VTQ0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TTC39BQ5VTQ0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TTC39BQ5VTQ0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
TTC39BQ5VTQ0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TTC39BQ5VTQ0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.36■■□□□ 1.01
TTC39BQ5VTQ0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.36■■□□□ 1.01
TTC39BQ5VTQ0 AF201337.1-201ENST00000520239 748 ntBASIC21.36■■□□□ 1.01
TTC39BQ5VTQ0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.36■■□□□ 1.01
TTC39BQ5VTQ0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.36■■□□□ 1.01
TTC39BQ5VTQ0 FAM21FP-204ENST00000608637 956 ntBASIC21.36■■□□□ 1.01
TTC39BQ5VTQ0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
TTC39BQ5VTQ0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
TTC39BQ5VTQ0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.36■■□□□ 1.01
TTC39BQ5VTQ0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TTC39BQ5VTQ0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
TTC39BQ5VTQ0 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TTC39BQ5VTQ0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TTC39BQ5VTQ0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
TTC39BQ5VTQ0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TTC39BQ5VTQ0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms