Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
RUNDC3AQ59EK9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.42■□□□□ 0.7
RUNDC3AQ59EK9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.42■□□□□ 0.7
RUNDC3AQ59EK9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.42■□□□□ 0.7
RUNDC3AQ59EK9 AP001330.3-201ENST00000520123 633 ntBASIC19.42■□□□□ 0.7
RUNDC3AQ59EK9 AC012414.1-201ENST00000556676 535 ntBASIC19.42■□□□□ 0.7
RUNDC3AQ59EK9 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.42■□□□□ 0.7
RUNDC3AQ59EK9 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RUNDC3AQ59EK9 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.42■□□□□ 0.7
RUNDC3AQ59EK9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.42■□□□□ 0.7
RUNDC3AQ59EK9 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.42■□□□□ 0.7
RUNDC3AQ59EK9 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.42■□□□□ 0.7
RUNDC3AQ59EK9 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RUNDC3AQ59EK9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RUNDC3AQ59EK9 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RUNDC3AQ59EK9 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RUNDC3AQ59EK9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RUNDC3AQ59EK9 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.41■□□□□ 0.7
RUNDC3AQ59EK9 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RUNDC3AQ59EK9 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.41■□□□□ 0.7
RUNDC3AQ59EK9 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RUNDC3AQ59EK9 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RUNDC3AQ59EK9 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RUNDC3AQ59EK9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RUNDC3AQ59EK9 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.41■□□□□ 0.7
RUNDC3AQ59EK9 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.41■□□□□ 0.7
RUNDC3AQ59EK9 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RUNDC3AQ59EK9 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.41■□□□□ 0.7
RUNDC3AQ59EK9 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.41■□□□□ 0.7
RUNDC3AQ59EK9 AC106739.1-201ENST00000617035 715 ntBASIC19.41■□□□□ 0.7
RUNDC3AQ59EK9 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RUNDC3AQ59EK9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.41■□□□□ 0.7
RUNDC3AQ59EK9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RUNDC3AQ59EK9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.41■□□□□ 0.7
RUNDC3AQ59EK9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.41■□□□□ 0.7
RUNDC3AQ59EK9 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RUNDC3AQ59EK9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RUNDC3AQ59EK9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RUNDC3AQ59EK9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RUNDC3AQ59EK9 AC092720.2-201ENST00000602388 1665 ntBASIC19.4■□□□□ 0.7
RUNDC3AQ59EK9 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RUNDC3AQ59EK9 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RUNDC3AQ59EK9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
RUNDC3AQ59EK9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.4■□□□□ 0.7
RUNDC3AQ59EK9 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RUNDC3AQ59EK9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RUNDC3AQ59EK9 EDA-201ENST00000338901 1233 ntBASIC19.4■□□□□ 0.7
RUNDC3AQ59EK9 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RUNDC3AQ59EK9 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RUNDC3AQ59EK9 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RUNDC3AQ59EK9 AC096631.2-201ENST00000436136 790 ntBASIC19.4■□□□□ 0.7
RUNDC3AQ59EK9 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.4■□□□□ 0.7
RUNDC3AQ59EK9 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.4■□□□□ 0.7
RUNDC3AQ59EK9 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RUNDC3AQ59EK9 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.4■□□□□ 0.7
RUNDC3AQ59EK9 RASA4CP-201ENST00000424092 1398 ntBASIC19.4■□□□□ 0.7
RUNDC3AQ59EK9 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RUNDC3AQ59EK9 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.4■□□□□ 0.7
RUNDC3AQ59EK9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RUNDC3AQ59EK9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RUNDC3AQ59EK9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RUNDC3AQ59EK9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RUNDC3AQ59EK9 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RUNDC3AQ59EK9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.4■□□□□ 0.7
RUNDC3AQ59EK9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RUNDC3AQ59EK9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RUNDC3AQ59EK9 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
RUNDC3AQ59EK9 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RUNDC3AQ59EK9 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.39■□□□□ 0.69
RUNDC3AQ59EK9 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RUNDC3AQ59EK9 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.39■□□□□ 0.69
RUNDC3AQ59EK9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RUNDC3AQ59EK9 TPRG1LP1-201ENST00000598702 760 ntBASIC19.39■□□□□ 0.69
RUNDC3AQ59EK9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RUNDC3AQ59EK9 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RUNDC3AQ59EK9 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.39■□□□□ 0.69
RUNDC3AQ59EK9 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RUNDC3AQ59EK9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RUNDC3AQ59EK9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RUNDC3AQ59EK9 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RUNDC3AQ59EK9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.38■□□□□ 0.69
RUNDC3AQ59EK9 POU5F1P4-201ENST00000413175 1085 ntBASIC19.38■□□□□ 0.69
RUNDC3AQ59EK9 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.38■□□□□ 0.69
RUNDC3AQ59EK9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.38■□□□□ 0.69
RUNDC3AQ59EK9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RUNDC3AQ59EK9 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RUNDC3AQ59EK9 AC008175.2-201ENST00000612840 297 ntBASIC19.38■□□□□ 0.69
RUNDC3AQ59EK9 RARRES2P11-201ENST00000635158 484 ntBASIC19.38■□□□□ 0.69
RUNDC3AQ59EK9 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.37■□□□□ 0.69
RUNDC3AQ59EK9 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RUNDC3AQ59EK9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.37■□□□□ 0.69
RUNDC3AQ59EK9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.37■□□□□ 0.69
RUNDC3AQ59EK9 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RUNDC3AQ59EK9 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RUNDC3AQ59EK9 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RUNDC3AQ59EK9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RUNDC3AQ59EK9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RUNDC3AQ59EK9 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.37■□□□□ 0.69
RUNDC3AQ59EK9 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RUNDC3AQ59EK9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms