Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CCDC58Q4VC31 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC58Q4VC31 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC58Q4VC31 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC58Q4VC31 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CCDC58Q4VC31 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC58Q4VC31 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC58Q4VC31 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC58Q4VC31 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC58Q4VC31 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC58Q4VC31 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC58Q4VC31 GUSBP5-201ENST00000418136 578 ntBASIC18.31■□□□□ 0.52
CCDC58Q4VC31 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC58Q4VC31 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC58Q4VC31 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC58Q4VC31 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CCDC58Q4VC31 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC58Q4VC31 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC58Q4VC31 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC58Q4VC31 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CCDC58Q4VC31 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC58Q4VC31 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC58Q4VC31 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC58Q4VC31 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC58Q4VC31 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC58Q4VC31 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC58Q4VC31 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC58Q4VC31 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC58Q4VC31 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC58Q4VC31 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC58Q4VC31 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC58Q4VC31 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC58Q4VC31 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC58Q4VC31 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC58Q4VC31 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC58Q4VC31 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC58Q4VC31 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC58Q4VC31 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC58Q4VC31 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC58Q4VC31 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC58Q4VC31 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.3■□□□□ 0.52
CCDC58Q4VC31 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC58Q4VC31 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC58Q4VC31 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CCDC58Q4VC31 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC58Q4VC31 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC58Q4VC31 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC58Q4VC31 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC58Q4VC31 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC58Q4VC31 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.3■□□□□ 0.52
CCDC58Q4VC31 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC58Q4VC31 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CCDC58Q4VC31 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC58Q4VC31 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC58Q4VC31 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC58Q4VC31 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CCDC58Q4VC31 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC58Q4VC31 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC58Q4VC31 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
CCDC58Q4VC31 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC58Q4VC31 AC133561.4-201ENST00000566112 224 ntBASIC18.29■□□□□ 0.52
CCDC58Q4VC31 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CCDC58Q4VC31 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC58Q4VC31 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCDC58Q4VC31 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC58Q4VC31 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC58Q4VC31 AL162377.1-201ENST00000618844 1793 ntBASIC18.29■□□□□ 0.52
CCDC58Q4VC31 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CCDC58Q4VC31 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CCDC58Q4VC31 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC58Q4VC31 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC58Q4VC31 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC58Q4VC31 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC58Q4VC31 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CCDC58Q4VC31 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC58Q4VC31 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC58Q4VC31 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.28■□□□□ 0.52
CCDC58Q4VC31 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CCDC58Q4VC31 AL035685.1-201ENST00000636663 812 ntBASIC18.28■□□□□ 0.52
CCDC58Q4VC31 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC58Q4VC31 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC58Q4VC31 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC58Q4VC31 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC58Q4VC31 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC58Q4VC31 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC58Q4VC31 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC58Q4VC31 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC58Q4VC31 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC58Q4VC31 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC58Q4VC31 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC58Q4VC31 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC58Q4VC31 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CCDC58Q4VC31 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CCDC58Q4VC31 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC58Q4VC31 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC58Q4VC31 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.27■□□□□ 0.52
CCDC58Q4VC31 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC58Q4VC31 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC58Q4VC31 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.27■□□□□ 0.52
CCDC58Q4VC31 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms