Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.84■□□□□ 0.45
SNAI3Q3KNW1 AC091799.1-201ENST00000422823 811 ntBASIC17.84■□□□□ 0.45
SNAI3Q3KNW1 KRT18P5-201ENST00000436075 1291 ntBASIC17.84■□□□□ 0.45
SNAI3Q3KNW1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.84■□□□□ 0.45
SNAI3Q3KNW1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.84■□□□□ 0.45
SNAI3Q3KNW1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.84■□□□□ 0.45
SNAI3Q3KNW1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.84■□□□□ 0.45
SNAI3Q3KNW1 AC243732.1-201ENST00000612648 864 ntBASIC17.84■□□□□ 0.45
SNAI3Q3KNW1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.84■□□□□ 0.45
SNAI3Q3KNW1 MYCNOS-205ENST00000641950 531 ntBASIC17.84■□□□□ 0.45
SNAI3Q3KNW1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNAI3Q3KNW1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNAI3Q3KNW1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
SNAI3Q3KNW1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.84■□□□□ 0.45
SNAI3Q3KNW1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNAI3Q3KNW1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.84■□□□□ 0.45
SNAI3Q3KNW1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNAI3Q3KNW1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SNAI3Q3KNW1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SNAI3Q3KNW1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SNAI3Q3KNW1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
SNAI3Q3KNW1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
SNAI3Q3KNW1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
SNAI3Q3KNW1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
SNAI3Q3KNW1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
SNAI3Q3KNW1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.83■□□□□ 0.44
SNAI3Q3KNW1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SNAI3Q3KNW1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.83■□□□□ 0.44
SNAI3Q3KNW1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.83■□□□□ 0.44
SNAI3Q3KNW1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.83■□□□□ 0.44
SNAI3Q3KNW1 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.83■□□□□ 0.44
SNAI3Q3KNW1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.83■□□□□ 0.44
SNAI3Q3KNW1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.83■□□□□ 0.44
SNAI3Q3KNW1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.83■□□□□ 0.44
SNAI3Q3KNW1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.82■□□□□ 0.44
SNAI3Q3KNW1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNAI3Q3KNW1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SNAI3Q3KNW1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNAI3Q3KNW1 GABARAPL3-202ENST00000624044 1851 ntBASIC17.82■□□□□ 0.44
SNAI3Q3KNW1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SNAI3Q3KNW1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.82■□□□□ 0.44
SNAI3Q3KNW1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNAI3Q3KNW1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SNAI3Q3KNW1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNAI3Q3KNW1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.82■□□□□ 0.44
SNAI3Q3KNW1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.82■□□□□ 0.44
SNAI3Q3KNW1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.82■□□□□ 0.44
SNAI3Q3KNW1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNAI3Q3KNW1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SNAI3Q3KNW1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNAI3Q3KNW1 AL121603.2-201ENST00000557373 2117 ntBASIC17.82■□□□□ 0.44
SNAI3Q3KNW1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.82■□□□□ 0.44
SNAI3Q3KNW1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNAI3Q3KNW1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNAI3Q3KNW1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.82■□□□□ 0.44
SNAI3Q3KNW1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNAI3Q3KNW1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNAI3Q3KNW1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
SNAI3Q3KNW1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNAI3Q3KNW1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNAI3Q3KNW1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNAI3Q3KNW1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNAI3Q3KNW1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNAI3Q3KNW1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.82■□□□□ 0.44
SNAI3Q3KNW1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNAI3Q3KNW1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SNAI3Q3KNW1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.81■□□□□ 0.44
SNAI3Q3KNW1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SNAI3Q3KNW1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SNAI3Q3KNW1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNAI3Q3KNW1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNAI3Q3KNW1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SNAI3Q3KNW1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SNAI3Q3KNW1 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNAI3Q3KNW1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SNAI3Q3KNW1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.81■□□□□ 0.44
SNAI3Q3KNW1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.81■□□□□ 0.44
SNAI3Q3KNW1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.81■□□□□ 0.44
SNAI3Q3KNW1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SNAI3Q3KNW1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SNAI3Q3KNW1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNAI3Q3KNW1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNAI3Q3KNW1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SNAI3Q3KNW1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNAI3Q3KNW1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.81■□□□□ 0.44
SNAI3Q3KNW1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.8■□□□□ 0.44
SNAI3Q3KNW1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNAI3Q3KNW1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SNAI3Q3KNW1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SNAI3Q3KNW1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.8■□□□□ 0.44
SNAI3Q3KNW1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SNAI3Q3KNW1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNAI3Q3KNW1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
SNAI3Q3KNW1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.8■□□□□ 0.44
SNAI3Q3KNW1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNAI3Q3KNW1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.8■□□□□ 0.44
SNAI3Q3KNW1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SNAI3Q3KNW1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNAI3Q3KNW1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.8■□□□□ 0.44
SNAI3Q3KNW1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms