Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
ERCC6LQ2NKX8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ERCC6LQ2NKX8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ERCC6LQ2NKX8 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ERCC6LQ2NKX8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ERCC6LQ2NKX8 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ERCC6LQ2NKX8 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ERCC6LQ2NKX8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ERCC6LQ2NKX8 AC005332.7-201ENST00000614046 2005 ntBASIC21.77■■□□□ 1.08
ERCC6LQ2NKX8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
ERCC6LQ2NKX8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ERCC6LQ2NKX8 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
ERCC6LQ2NKX8 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.77■■□□□ 1.08
ERCC6LQ2NKX8 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ERCC6LQ2NKX8 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ERCC6LQ2NKX8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.77■■□□□ 1.08
ERCC6LQ2NKX8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ERCC6LQ2NKX8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
ERCC6LQ2NKX8 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.77■■□□□ 1.07
ERCC6LQ2NKX8 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
ERCC6LQ2NKX8 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.77■■□□□ 1.07
ERCC6LQ2NKX8 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
ERCC6LQ2NKX8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.77■■□□□ 1.07
ERCC6LQ2NKX8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
ERCC6LQ2NKX8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.76■■□□□ 1.07
ERCC6LQ2NKX8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ERCC6LQ2NKX8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.76■■□□□ 1.07
ERCC6LQ2NKX8 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ERCC6LQ2NKX8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ERCC6LQ2NKX8 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ERCC6LQ2NKX8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.76■■□□□ 1.07
ERCC6LQ2NKX8 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
ERCC6LQ2NKX8 AC137630.3-201ENST00000607245 391 ntBASIC21.76■■□□□ 1.07
ERCC6LQ2NKX8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.76■■□□□ 1.07
ERCC6LQ2NKX8 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.76■■□□□ 1.07
ERCC6LQ2NKX8 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ERCC6LQ2NKX8 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ERCC6LQ2NKX8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
ERCC6LQ2NKX8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ERCC6LQ2NKX8 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.76■■□□□ 1.07
ERCC6LQ2NKX8 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.76■■□□□ 1.07
ERCC6LQ2NKX8 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ERCC6LQ2NKX8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
ERCC6LQ2NKX8 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ERCC6LQ2NKX8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ERCC6LQ2NKX8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
ERCC6LQ2NKX8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ERCC6LQ2NKX8 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ERCC6LQ2NKX8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
ERCC6LQ2NKX8 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.75■■□□□ 1.07
ERCC6LQ2NKX8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
ERCC6LQ2NKX8 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
ERCC6LQ2NKX8 YBX1P4-201ENST00000392794 808 ntBASIC21.75■■□□□ 1.07
ERCC6LQ2NKX8 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ERCC6LQ2NKX8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.75■■□□□ 1.07
ERCC6LQ2NKX8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
ERCC6LQ2NKX8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.75■■□□□ 1.07
ERCC6LQ2NKX8 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ERCC6LQ2NKX8 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.75■■□□□ 1.07
ERCC6LQ2NKX8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ERCC6LQ2NKX8 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ERCC6LQ2NKX8 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ERCC6LQ2NKX8 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
ERCC6LQ2NKX8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
ERCC6LQ2NKX8 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ERCC6LQ2NKX8 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
ERCC6LQ2NKX8 Z92544.1-202ENST00000571933 1220 ntBASIC21.74■■□□□ 1.07
ERCC6LQ2NKX8 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ERCC6LQ2NKX8 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
ERCC6LQ2NKX8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ERCC6LQ2NKX8 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ERCC6LQ2NKX8 AC133637.1-201ENST00000624115 1537 ntBASIC21.74■■□□□ 1.07
ERCC6LQ2NKX8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ERCC6LQ2NKX8 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ERCC6LQ2NKX8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
ERCC6LQ2NKX8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ERCC6LQ2NKX8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ERCC6LQ2NKX8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.73■■□□□ 1.07
ERCC6LQ2NKX8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ERCC6LQ2NKX8 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ERCC6LQ2NKX8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ERCC6LQ2NKX8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ERCC6LQ2NKX8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
ERCC6LQ2NKX8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.73■■□□□ 1.07
ERCC6LQ2NKX8 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ERCC6LQ2NKX8 MIR4508-201ENST00000584178 70 ntBASIC21.73■■□□□ 1.07
ERCC6LQ2NKX8 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.73■■□□□ 1.07
ERCC6LQ2NKX8 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ERCC6LQ2NKX8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
ERCC6LQ2NKX8 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ERCC6LQ2NKX8 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
ERCC6LQ2NKX8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.73■■□□□ 1.07
ERCC6LQ2NKX8 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
ERCC6LQ2NKX8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ERCC6LQ2NKX8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ERCC6LQ2NKX8 AC093503.3-201ENST00000624917 2352 ntBASIC21.73■■□□□ 1.07
ERCC6LQ2NKX8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.73■■□□□ 1.07
ERCC6LQ2NKX8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.72■■□□□ 1.07
ERCC6LQ2NKX8 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.72■■□□□ 1.07
ERCC6LQ2NKX8 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms