Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 AC239809.2-201ENST00000415381 517 ntBASIC20.4■□□□□ 0.86
SF3A2Q15428 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.4■□□□□ 0.86
SF3A2Q15428 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.4■□□□□ 0.86
SF3A2Q15428 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.4■□□□□ 0.86
SF3A2Q15428 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.4■□□□□ 0.86
SF3A2Q15428 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SF3A2Q15428 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.39■□□□□ 0.86
SF3A2Q15428 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.39■□□□□ 0.86
SF3A2Q15428 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
SF3A2Q15428 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SF3A2Q15428 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
SF3A2Q15428 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SF3A2Q15428 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SF3A2Q15428 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
SF3A2Q15428 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SF3A2Q15428 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.39■□□□□ 0.85
SF3A2Q15428 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SF3A2Q15428 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SF3A2Q15428 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SF3A2Q15428 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SF3A2Q15428 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SF3A2Q15428 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.39■□□□□ 0.85
SF3A2Q15428 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SF3A2Q15428 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.39■□□□□ 0.85
SF3A2Q15428 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.39■□□□□ 0.85
SF3A2Q15428 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SF3A2Q15428 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.39■□□□□ 0.85
SF3A2Q15428 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SF3A2Q15428 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SF3A2Q15428 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
SF3A2Q15428 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SF3A2Q15428 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.38■□□□□ 0.85
SF3A2Q15428 AL135905.2-201ENST00000584934 1404 ntBASIC20.38■□□□□ 0.85
SF3A2Q15428 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SF3A2Q15428 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.38■□□□□ 0.85
SF3A2Q15428 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SF3A2Q15428 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.38■□□□□ 0.85
SF3A2Q15428 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SF3A2Q15428 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SF3A2Q15428 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.38■□□□□ 0.85
SF3A2Q15428 AC133681.1-201ENST00000465482 601 ntBASIC20.38■□□□□ 0.85
SF3A2Q15428 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.38■□□□□ 0.85
SF3A2Q15428 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
SF3A2Q15428 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.38■□□□□ 0.85
SF3A2Q15428 CD177P1-201ENST00000606252 935 ntBASIC20.38■□□□□ 0.85
SF3A2Q15428 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SF3A2Q15428 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SF3A2Q15428 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SF3A2Q15428 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SF3A2Q15428 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SF3A2Q15428 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.37■□□□□ 0.85
SF3A2Q15428 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SF3A2Q15428 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.37■□□□□ 0.85
SF3A2Q15428 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
SF3A2Q15428 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
SF3A2Q15428 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SF3A2Q15428 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.37■□□□□ 0.85
SF3A2Q15428 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.37■□□□□ 0.85
SF3A2Q15428 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.37■□□□□ 0.85
SF3A2Q15428 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SF3A2Q15428 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SF3A2Q15428 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SF3A2Q15428 AC003102.1-202ENST00000563394 1796 ntBASIC20.36■□□□□ 0.85
SF3A2Q15428 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SF3A2Q15428 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.36■□□□□ 0.85
SF3A2Q15428 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SF3A2Q15428 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.36■□□□□ 0.85
SF3A2Q15428 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SF3A2Q15428 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SF3A2Q15428 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SF3A2Q15428 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SF3A2Q15428 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SF3A2Q15428 KRASP1-201ENST00000407852 552 ntBASIC20.36■□□□□ 0.85
SF3A2Q15428 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SF3A2Q15428 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SF3A2Q15428 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.36■□□□□ 0.85
SF3A2Q15428 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SF3A2Q15428 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.36■□□□□ 0.85
SF3A2Q15428 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SF3A2Q15428 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.36■□□□□ 0.85
SF3A2Q15428 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SF3A2Q15428 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SF3A2Q15428 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.36■□□□□ 0.85
SF3A2Q15428 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.36■□□□□ 0.85
SF3A2Q15428 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SF3A2Q15428 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.36■□□□□ 0.85
SF3A2Q15428 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
SF3A2Q15428 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SF3A2Q15428 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SF3A2Q15428 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SF3A2Q15428 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.35■□□□□ 0.85
SF3A2Q15428 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SF3A2Q15428 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SF3A2Q15428 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SF3A2Q15428 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
SF3A2Q15428 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.35■□□□□ 0.85
SF3A2Q15428 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SF3A2Q15428 PRKY-204ENST00000533551 1019 ntBASIC20.35■□□□□ 0.85
SF3A2Q15428 AC110285.5-201ENST00000611501 352 ntBASIC20.35■□□□□ 0.85
SF3A2Q15428 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms