Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.78■□□□□ 0.92
CDH17Q12864 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDH17Q12864 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.78■□□□□ 0.92
CDH17Q12864 UBE2DNL-204ENST00000602536 740 ntBASIC20.78■□□□□ 0.92
CDH17Q12864 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.78■□□□□ 0.92
CDH17Q12864 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.78■□□□□ 0.92
CDH17Q12864 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH17Q12864 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH17Q12864 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH17Q12864 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDH17Q12864 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.78■□□□□ 0.92
CDH17Q12864 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CDH17Q12864 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH17Q12864 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.77■□□□□ 0.92
CDH17Q12864 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDH17Q12864 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.77■□□□□ 0.92
CDH17Q12864 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH17Q12864 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDH17Q12864 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
CDH17Q12864 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.77■□□□□ 0.92
CDH17Q12864 AC091799.1-201ENST00000422823 811 ntBASIC20.77■□□□□ 0.92
CDH17Q12864 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.77■□□□□ 0.92
CDH17Q12864 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.77■□□□□ 0.92
CDH17Q12864 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.77■□□□□ 0.92
CDH17Q12864 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH17Q12864 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH17Q12864 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.77■□□□□ 0.91
CDH17Q12864 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.77■□□□□ 0.91
CDH17Q12864 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CDH17Q12864 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH17Q12864 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH17Q12864 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.76■□□□□ 0.91
CDH17Q12864 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.76■□□□□ 0.91
CDH17Q12864 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.76■□□□□ 0.91
CDH17Q12864 AC087623.3-201ENST00000607047 1098 ntBASIC20.76■□□□□ 0.91
CDH17Q12864 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CDH17Q12864 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDH17Q12864 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.76■□□□□ 0.91
CDH17Q12864 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CDH17Q12864 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CDH17Q12864 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH17Q12864 AC020907.5-201ENST00000624372 1936 ntBASIC20.76■□□□□ 0.91
CDH17Q12864 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
CDH17Q12864 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
CDH17Q12864 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.76■□□□□ 0.91
CDH17Q12864 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.76■□□□□ 0.91
CDH17Q12864 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDH17Q12864 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDH17Q12864 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
CDH17Q12864 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.75■□□□□ 0.91
CDH17Q12864 AC073130.3-201ENST00000624389 2278 ntBASIC20.75■□□□□ 0.91
CDH17Q12864 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
CDH17Q12864 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.75■□□□□ 0.91
CDH17Q12864 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CDH17Q12864 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH17Q12864 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDH17Q12864 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH17Q12864 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CDH17Q12864 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
CDH17Q12864 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.75■□□□□ 0.91
CDH17Q12864 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CDH17Q12864 MYCNOS-205ENST00000641950 531 ntBASIC20.75■□□□□ 0.91
CDH17Q12864 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH17Q12864 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH17Q12864 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH17Q12864 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CDH17Q12864 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH17Q12864 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH17Q12864 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDH17Q12864 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDH17Q12864 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH17Q12864 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CDH17Q12864 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CDH17Q12864 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH17Q12864 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH17Q12864 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.74■□□□□ 0.91
CDH17Q12864 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH17Q12864 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.74■□□□□ 0.91
CDH17Q12864 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.74■□□□□ 0.91
CDH17Q12864 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.74■□□□□ 0.91
CDH17Q12864 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.74■□□□□ 0.91
CDH17Q12864 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDH17Q12864 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.74■□□□□ 0.91
CDH17Q12864 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CDH17Q12864 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDH17Q12864 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH17Q12864 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CDH17Q12864 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH17Q12864 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH17Q12864 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH17Q12864 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDH17Q12864 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CDH17Q12864 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CDH17Q12864 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CDH17Q12864 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.73■□□□□ 0.91
CDH17Q12864 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH17Q12864 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.73■□□□□ 0.91
CDH17Q12864 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CDH17Q12864 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH17Q12864 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms