Protein–RNA interactions for Protein: Q06406

LSM6, U6 snRNA-associated Sm-like protein LSm6, yeastyeast

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM6Q06406 PLC1YPL268W 2610 nt0.9□□□□□ -2.26
LSM6Q06406 YGL118CYGL118C 438 nt0.9□□□□□ -2.27
LSM6Q06406 SRL4YPL033C 846 nt0.9□□□□□ -2.27
LSM6Q06406 NOP12YOL041C 1380 nt0.9□□□□□ -2.27
LSM6Q06406 SMC4YLR086W 4257 nt0.89□□□□□ -2.27
LSM6Q06406 PMD1YER132C 5262 nt0.89□□□□□ -2.27
LSM6Q06406 CTR9YOL145C 3234 nt0.89□□□□□ -2.27
LSM6Q06406 JIP5YPR169W 1479 nt0.89□□□□□ -2.27
LSM6Q06406 RPL34BYIL052C 366 nt0.89□□□□□ -2.27
LSM6Q06406 SHE2YKL130C 741 nt0.89□□□□□ -2.27
LSM6Q06406 YPR177CYPR177C 372 nt0.89□□□□□ -2.27
LSM6Q06406 YJR029WYJR029W 5268 nt0.89□□□□□ -2.27
LSM6Q06406 YPR137C-BYPR137C-B 5268 nt0.89□□□□□ -2.27
LSM6Q06406 APL1YJR005W 2103 nt0.89□□□□□ -2.27
LSM6Q06406 ASI3YNL008C 2031 nt0.88□□□□□ -2.27
LSM6Q06406 RPH1YER169W 2391 nt0.88□□□□□ -2.27
LSM6Q06406 MFA1YDR461W 111 nt0.88□□□□□ -2.27
LSM6Q06406 YGL165CYGL165C 579 nt0.88□□□□□ -2.27
LSM6Q06406 ALB1YJL122W 528 nt0.88□□□□□ -2.27
LSM6Q06406 SNC1YAL030W 354 nt0.88□□□□□ -2.27
LSM6Q06406 ERG29YMR134W 714 nt0.88□□□□□ -2.27
LSM6Q06406 TBS1YBR150C 3285 nt0.88□□□□□ -2.27
LSM6Q06406 VAC8YEL013W 1737 nt0.88□□□□□ -2.27
LSM6Q06406 BST1YFL025C 3090 nt0.88□□□□□ -2.27
LSM6Q06406 SEC63YOR254C 1992 nt0.87□□□□□ -2.27
LSM6Q06406 FRK1YPL141C 2598 nt0.87□□□□□ -2.27
LSM6Q06406 NOP15YNL110C 663 nt0.87□□□□□ -2.27
LSM6Q06406 MRPL40YPL173W 894 nt0.87□□□□□ -2.27
LSM6Q06406 CTF4YPR135W 2784 nt0.87□□□□□ -2.27
LSM6Q06406 SRB4YER022W 2064 nt0.87□□□□□ -2.27
LSM6Q06406 MDS3YGL197W 4464 nt0.86□□□□□ -2.27
LSM6Q06406 AIM6YDL237W 1173 nt0.86□□□□□ -2.27
LSM6Q06406 YHR214W-AYHR214W-A 486 nt0.86□□□□□ -2.27
LSM6Q06406 YJL015CYJL015C 285 nt0.86□□□□□ -2.27
LSM6Q06406 FCF2YLR051C 654 nt0.86□□□□□ -2.27
LSM6Q06406 YAR068WYAR068W 486 nt0.86□□□□□ -2.27
LSM6Q06406 YMR099CYMR099C 894 nt0.86□□□□□ -2.27
LSM6Q06406 RXT2YBR095C 1293 nt0.86□□□□□ -2.27
LSM6Q06406 BFR1YOR198C 1413 nt0.86□□□□□ -2.27
LSM6Q06406 SKP2YNL311C 2292 nt0.86□□□□□ -2.27
LSM6Q06406 MSH5YDL154W 2706 nt0.86□□□□□ -2.27
LSM6Q06406 ADR1YDR216W 3972 nt0.85□□□□□ -2.27
LSM6Q06406 YDL062WYDL062W 426 nt0.85□□□□□ -2.27
LSM6Q06406 YFR054CYFR054C 579 nt0.85□□□□□ -2.27
LSM6Q06406 YLR307C-AYLR307C-A 264 nt0.85□□□□□ -2.27
LSM6Q06406 DYN3YMR299C 939 nt0.85□□□□□ -2.27
LSM6Q06406 MER1YNL210W 813 nt0.85□□□□□ -2.27
LSM6Q06406 ARL1YBR164C 552 nt0.85□□□□□ -2.27
LSM6Q06406 STB4YMR019W 2850 nt0.85□□□□□ -2.27
LSM6Q06406 MDM36YPR083W 1740 nt0.84□□□□□ -2.27
LSM6Q06406 CTF18YMR078C 2226 nt0.84□□□□□ -2.27
LSM6Q06406 GUK1YDR454C 564 nt0.84□□□□□ -2.27
LSM6Q06406 CIC1YHR052W 1131 nt0.84□□□□□ -2.27
LSM6Q06406 MCM22YJR135C 720 nt0.84□□□□□ -2.27
LSM6Q06406 YLR225CYLR225C 1224 nt0.84□□□□□ -2.27
LSM6Q06406 YLR311CYLR311C 348 nt0.84□□□□□ -2.27
LSM6Q06406 YML047W-AYML047W-A 366 nt0.84□□□□□ -2.27
LSM6Q06406 HMI1YOL095C 2121 nt0.84□□□□□ -2.27
LSM6Q06406 ATX2YOR079C 942 nt0.84□□□□□ -2.27
LSM6Q06406 MNL2YLR057W 2550 nt0.84□□□□□ -2.28
LSM6Q06406 ASM4YDL088C 1587 nt0.83□□□□□ -2.28
LSM6Q06406 TRM3YDL112W 4311 nt0.83□□□□□ -2.28
LSM6Q06406 CDC53YDL132W 2448 nt0.83□□□□□ -2.28
LSM6Q06406 YDR124WYDR124W 975 nt0.83□□□□□ -2.28
LSM6Q06406 RMD5YDR255C 1266 nt0.83□□□□□ -2.28
LSM6Q06406 RBL2YOR265W 321 nt0.83□□□□□ -2.28
LSM6Q06406 YCL007CYCL007C 393 nt0.83□□□□□ -2.28
LSM6Q06406 SPT7YBR081C 3999 nt0.83□□□□□ -2.28
LSM6Q06406 MLH3YPL164C 2148 nt0.82□□□□□ -2.28
LSM6Q06406 HIR3YJR140C 4947 nt0.82□□□□□ -2.28
LSM6Q06406 CDC50YCR094W 1176 nt0.82□□□□□ -2.28
LSM6Q06406 YFL015CYFL015C 495 nt0.82□□□□□ -2.28
LSM6Q06406 YIL141WYIL141W 390 nt0.82□□□□□ -2.28
LSM6Q06406 CSI1YMR025W 888 nt0.82□□□□□ -2.28
LSM6Q06406 CMC2YBL059C-A 330 nt0.82□□□□□ -2.28
LSM6Q06406 YDR170W-AYDR170W-A 1323 nt0.82□□□□□ -2.28
LSM6Q06406 PSO2YMR137C 1986 nt0.81□□□□□ -2.28
LSM6Q06406 YDR381C-AYDR381C-A 345 nt0.81□□□□□ -2.28
LSM6Q06406 YFR056CYFR056C 369 nt0.81□□□□□ -2.28
LSM6Q06406 MMS2YGL087C 414 nt0.81□□□□□ -2.28
LSM6Q06406 GTR2YGR163W 1026 nt0.81□□□□□ -2.28
LSM6Q06406 YHR182C-AYHR182C-A 474 nt0.81□□□□□ -2.28
LSM6Q06406 GPN3YLR243W 819 nt0.81□□□□□ -2.28
LSM6Q06406 RAD10YML095C 633 nt0.81□□□□□ -2.28
LSM6Q06406 EGD1YPL037C 474 nt0.81□□□□□ -2.28
LSM6Q06406 YPR074W-AYPR074W-A 171 nt0.81□□□□□ -2.28
LSM6Q06406 CSH1YBR161W 1131 nt0.81□□□□□ -2.28
LSM6Q06406 NTC20YBR188C 423 nt0.81□□□□□ -2.28
LSM6Q06406 COX1Q0045 1605 nt0.81□□□□□ -2.28
LSM6Q06406 HSE1YHL002W 1359 nt0.81□□□□□ -2.28
LSM6Q06406 RPL35BYDL136W 363 nt0.8□□□□□ -2.28
LSM6Q06406 tH(GUG)E1tH(GUG)E1 72 nt0.8□□□□□ -2.28
LSM6Q06406 tH(GUG)E2tH(GUG)E2 72 nt0.8□□□□□ -2.28
LSM6Q06406 tH(GUG)G1tH(GUG)G1 72 nt0.8□□□□□ -2.28
LSM6Q06406 tH(GUG)G2tH(GUG)G2 72 nt0.8□□□□□ -2.28
LSM6Q06406 tH(GUG)HtH(GUG)H 72 nt0.8□□□□□ -2.28
LSM6Q06406 tH(GUG)KtH(GUG)K 72 nt0.8□□□□□ -2.28
LSM6Q06406 tH(GUG)MtH(GUG)M 72 nt0.8□□□□□ -2.28
LSM6Q06406 FSH1YHR049W 732 nt0.8□□□□□ -2.28
LSM6Q06406 FYV4YHR059W 393 nt0.8□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 19.7 ms