Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.68■□□□□ 0.9
PRAMEP78395 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PRAMEP78395 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEP78395 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEP78395 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PRAMEP78395 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEP78395 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.68■□□□□ 0.9
PRAMEP78395 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEP78395 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEP78395 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEP78395 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEP78395 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.68■□□□□ 0.9
PRAMEP78395 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEP78395 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.67■□□□□ 0.9
PRAMEP78395 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEP78395 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.67■□□□□ 0.9
PRAMEP78395 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
PRAMEP78395 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEP78395 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEP78395 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.67■□□□□ 0.9
PRAMEP78395 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.67■□□□□ 0.9
PRAMEP78395 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.67■□□□□ 0.9
PRAMEP78395 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEP78395 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEP78395 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEP78395 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
PRAMEP78395 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.67■□□□□ 0.9
PRAMEP78395 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.67■□□□□ 0.9
PRAMEP78395 AL157384.1-201ENST00000445995 2473 ntBASIC20.67■□□□□ 0.9
PRAMEP78395 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEP78395 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEP78395 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PRAMEP78395 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEP78395 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEP78395 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.67■□□□□ 0.9
PRAMEP78395 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEP78395 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.67■□□□□ 0.9
PRAMEP78395 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.66■□□□□ 0.9
PRAMEP78395 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEP78395 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.66■□□□□ 0.9
PRAMEP78395 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEP78395 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
PRAMEP78395 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.66■□□□□ 0.9
PRAMEP78395 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEP78395 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PRAMEP78395 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEP78395 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.66■□□□□ 0.9
PRAMEP78395 SLC7A5P1-201ENST00000568957 537 ntBASIC20.66■□□□□ 0.9
PRAMEP78395 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.66■□□□□ 0.9
PRAMEP78395 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.66■□□□□ 0.9
PRAMEP78395 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PRAMEP78395 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.66■□□□□ 0.9
PRAMEP78395 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.66■□□□□ 0.9
PRAMEP78395 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEP78395 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEP78395 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEP78395 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEP78395 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEP78395 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEP78395 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEP78395 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEP78395 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEP78395 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEP78395 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEP78395 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRAMEP78395 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
PRAMEP78395 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRAMEP78395 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRAMEP78395 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
PRAMEP78395 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PRAMEP78395 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRAMEP78395 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRAMEP78395 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRAMEP78395 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.65■□□□□ 0.9
PRAMEP78395 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.65■□□□□ 0.9
PRAMEP78395 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRAMEP78395 RARRES2P6-201ENST00000567333 442 ntBASIC20.65■□□□□ 0.9
PRAMEP78395 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRAMEP78395 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.65■□□□□ 0.9
PRAMEP78395 UBE2DNL-204ENST00000602536 740 ntBASIC20.65■□□□□ 0.9
PRAMEP78395 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.65■□□□□ 0.9
PRAMEP78395 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.65■□□□□ 0.9
PRAMEP78395 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PRAMEP78395 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
PRAMEP78395 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PRAMEP78395 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
PRAMEP78395 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.64■□□□□ 0.89
PRAMEP78395 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRAMEP78395 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PRAMEP78395 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.64■□□□□ 0.89
PRAMEP78395 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRAMEP78395 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.64■□□□□ 0.89
PRAMEP78395 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.64■□□□□ 0.89
PRAMEP78395 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
PRAMEP78395 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.64■□□□□ 0.89
PRAMEP78395 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.64■□□□□ 0.89
PRAMEP78395 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PRAMEP78395 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRAMEP78395 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PRAMEP78395 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms