Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP3S2P59780 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP3S2P59780 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
AP3S2P59780 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP3S2P59780 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.65■□□□□ 0.42
AP3S2P59780 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP3S2P59780 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
AP3S2P59780 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP3S2P59780 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.65■□□□□ 0.42
AP3S2P59780 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.65■□□□□ 0.42
AP3S2P59780 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.65■□□□□ 0.42
AP3S2P59780 AL451085.2-201ENST00000605085 799 ntBASIC17.65■□□□□ 0.42
AP3S2P59780 AC241377.3-202ENST00000626088 1088 ntBASIC17.65■□□□□ 0.42
AP3S2P59780 AC241585.3-202ENST00000628937 1088 ntBASIC17.65■□□□□ 0.42
AP3S2P59780 AC245100.8-202ENST00000629247 1058 ntBASIC17.65■□□□□ 0.42
AP3S2P59780 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
AP3S2P59780 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP3S2P59780 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP3S2P59780 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
AP3S2P59780 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP3S2P59780 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.65■□□□□ 0.42
AP3S2P59780 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
AP3S2P59780 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.65■□□□□ 0.42
AP3S2P59780 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
AP3S2P59780 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP3S2P59780 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
AP3S2P59780 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
AP3S2P59780 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.64■□□□□ 0.42
AP3S2P59780 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
AP3S2P59780 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP3S2P59780 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.64■□□□□ 0.41
AP3S2P59780 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
AP3S2P59780 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
AP3S2P59780 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP3S2P59780 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.64■□□□□ 0.41
AP3S2P59780 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.64■□□□□ 0.41
AP3S2P59780 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.64■□□□□ 0.41
AP3S2P59780 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP3S2P59780 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP3S2P59780 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP3S2P59780 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
AP3S2P59780 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
AP3S2P59780 AC010980.1-201ENST00000587192 1142 ntBASIC17.64■□□□□ 0.41
AP3S2P59780 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
AP3S2P59780 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP3S2P59780 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP3S2P59780 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
AP3S2P59780 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP3S2P59780 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP3S2P59780 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP3S2P59780 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.63■□□□□ 0.41
AP3S2P59780 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
AP3S2P59780 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
AP3S2P59780 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP3S2P59780 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP3S2P59780 TCF3P1-201ENST00000423021 1937 ntBASIC17.63■□□□□ 0.41
AP3S2P59780 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP3S2P59780 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP3S2P59780 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC17.63■□□□□ 0.41
AP3S2P59780 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
AP3S2P59780 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP3S2P59780 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
AP3S2P59780 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
AP3S2P59780 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP3S2P59780 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP3S2P59780 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP3S2P59780 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.63■□□□□ 0.41
AP3S2P59780 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP3S2P59780 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP3S2P59780 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AP3S2P59780 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
AP3S2P59780 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
AP3S2P59780 TNXA-203ENST00000507684 2038 ntBASIC17.62■□□□□ 0.41
AP3S2P59780 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.62■□□□□ 0.41
AP3S2P59780 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP3S2P59780 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
AP3S2P59780 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.62■□□□□ 0.41
AP3S2P59780 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP3S2P59780 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.62■□□□□ 0.41
AP3S2P59780 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP3S2P59780 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP3S2P59780 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.62■□□□□ 0.41
AP3S2P59780 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.62■□□□□ 0.41
AP3S2P59780 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AP3S2P59780 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AP3S2P59780 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP3S2P59780 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP3S2P59780 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
AP3S2P59780 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AP3S2P59780 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3S2P59780 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3S2P59780 AP000974.1-201ENST00000623909 2387 ntBASIC17.61■□□□□ 0.41
AP3S2P59780 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3S2P59780 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3S2P59780 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3S2P59780 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3S2P59780 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3S2P59780 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3S2P59780 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
AP3S2P59780 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms