Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN17P56750 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN17P56750 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN17P56750 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
CLDN17P56750 DUX4L16-201ENST00000555130 1264 ntBASIC18.35■□□□□ 0.53
CLDN17P56750 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.35■□□□□ 0.53
CLDN17P56750 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.35■□□□□ 0.53
CLDN17P56750 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.35■□□□□ 0.53
CLDN17P56750 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN17P56750 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CLDN17P56750 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CLDN17P56750 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CLDN17P56750 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CLDN17P56750 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN17P56750 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.35■□□□□ 0.53
CLDN17P56750 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN17P56750 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.35■□□□□ 0.53
CLDN17P56750 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.35■□□□□ 0.53
CLDN17P56750 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN17P56750 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN17P56750 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.34■□□□□ 0.53
CLDN17P56750 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN17P56750 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN17P56750 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN17P56750 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
CLDN17P56750 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN17P56750 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN17P56750 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN17P56750 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN17P56750 AC007322.3-201ENST00000426526 701 ntBASIC18.34■□□□□ 0.53
CLDN17P56750 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN17P56750 CDV3P1-201ENST00000471403 739 ntBASIC18.34■□□□□ 0.53
CLDN17P56750 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.34■□□□□ 0.53
CLDN17P56750 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.34■□□□□ 0.53
CLDN17P56750 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN17P56750 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.34■□□□□ 0.53
CLDN17P56750 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN17P56750 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN17P56750 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN17P56750 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN17P56750 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.33■□□□□ 0.53
CLDN17P56750 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN17P56750 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN17P56750 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN17P56750 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CLDN17P56750 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN17P56750 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CLDN17P56750 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN17P56750 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
CLDN17P56750 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.33■□□□□ 0.52
CLDN17P56750 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN17P56750 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CLDN17P56750 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CLDN17P56750 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN17P56750 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN17P56750 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN17P56750 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN17P56750 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.32■□□□□ 0.52
CLDN17P56750 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.32■□□□□ 0.52
CLDN17P56750 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN17P56750 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN17P56750 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN17P56750 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN17P56750 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.32■□□□□ 0.52
CLDN17P56750 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN17P56750 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN17P56750 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.32■□□□□ 0.52
CLDN17P56750 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN17P56750 AL591742.1-201ENST00000604433 565 ntBASIC18.32■□□□□ 0.52
CLDN17P56750 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.32■□□□□ 0.52
CLDN17P56750 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.32■□□□□ 0.52
CLDN17P56750 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CLDN17P56750 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN17P56750 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.32■□□□□ 0.52
CLDN17P56750 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN17P56750 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN17P56750 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN17P56750 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN17P56750 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN17P56750 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN17P56750 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.32■□□□□ 0.52
CLDN17P56750 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN17P56750 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.31■□□□□ 0.52
CLDN17P56750 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN17P56750 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
CLDN17P56750 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CLDN17P56750 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN17P56750 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN17P56750 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN17P56750 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CLDN17P56750 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN17P56750 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CLDN17P56750 AC007322.4-201ENST00000509611 723 ntBASIC18.31■□□□□ 0.52
CLDN17P56750 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.31■□□□□ 0.52
CLDN17P56750 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN17P56750 AC080038.1-201ENST00000611274 1154 ntBASIC18.31■□□□□ 0.52
CLDN17P56750 AC231657.2-201ENST00000624556 255 ntBASIC18.31■□□□□ 0.52
CLDN17P56750 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN17P56750 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.31■□□□□ 0.52
CLDN17P56750 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms