Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.436e-6■■■■□ 21.9
SUB1P53999 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.526e-6■■■■□ 21.9
SUB1P53999 ARAP1-211ENST00000495878 2758 ntTSL 1 (best)10.54□□□□□ -0.726e-6■■■■□ 21.9
SUB1P53999 ARAP1-219ENST00000544721 773 ntTSL 210.33□□□□□ -0.766e-6■■■■□ 21.9
SUB1P53999 ARAP1-209ENST00000455638 2683 ntTSL 5 BASIC10.2□□□□□ -0.786e-6■■■■□ 21.9
SUB1P53999 ARAP1-205ENST00000426523 4066 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.916e-6■■■■□ 21.9
SUB1P53999 ARAP1-207ENST00000429686 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.066e-6■■■■□ 21.9
SUB1P53999 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.562e-9■■■■□ 21.9
SUB1P53999 GDI2-207ENST00000479928 2499 ntTSL 26.97□□□□□ -1.292e-9■■■■□ 21.9
SUB1P53999 ARFGAP2-201ENST00000395449 1772 ntTSL 510.75□□□□□ -0.693e-7■■■■□ 21.9
SUB1P53999 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.133e-11■■■■□ 21.9
SUB1P53999 TUFM-204ENST00000569217 814 ntTSL 213.57□□□□□ -0.243e-11■■■■□ 21.9
SUB1P53999 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.65e-8■■■■□ 21.9
SUB1P53999 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC10.76□□□□□ -0.695e-8■■■■□ 21.9
SUB1P53999 CDK5RAP1-201ENST00000339269 1891 ntTSL 1 (best) BASIC10.34□□□□□ -0.755e-8■■■■□ 21.9
SUB1P53999 CDK5RAP1-210ENST00000473997 1930 ntTSL 2 BASIC9.29□□□□□ -0.925e-8■■■■□ 21.9
SUB1P53999 CDK5RAP1-207ENST00000461710 2650 ntTSL 29.24□□□□□ -0.935e-8■■■■□ 21.9
SUB1P53999 CDK5RAP1-216ENST00000498525 777 ntTSL 58.88□□□□□ -0.995e-8■■■■□ 21.9
SUB1P53999 CDK5RAP1-204ENST00000427097 974 ntTSL 56.26□□□□□ -1.415e-8■■■■□ 21.9
SUB1P53999 CDK5RAP1-213ENST00000482967 840 ntTSL 36.03□□□□□ -1.445e-8■■■■□ 21.9
SUB1P53999 CDK5RAP1-212ENST00000481964 945 ntTSL 56.03□□□□□ -1.445e-8■■■■□ 21.9
SUB1P53999 GSTM4-212ENST00000495742 1159 ntTSL 1 (best)15.22■□□□□ 0.035e-8■■■■□ 21.9
SUB1P53999 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC13.1□□□□□ -0.315e-8■■■■□ 21.9
SUB1P53999 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.565e-8■■■■□ 21.9
SUB1P53999 GSTM4-213ENST00000638994 657 ntTSL 5 BASIC9.05□□□□□ -0.965e-8■■■■□ 21.9
SUB1P53999 GSTM4-202ENST00000336075 657 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.965e-8■■■■□ 21.9
SUB1P53999 GSTM4-211ENST00000493395 913 ntTSL 37.87□□□□□ -1.155e-8■■■■□ 21.9
SUB1P53999 GSTM4-203ENST00000369833 3990 ntTSL 5 BASIC7.12□□□□□ -1.275e-8■■■■□ 21.9
SUB1P53999 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.552e-28■■■■□ 21.9
SUB1P53999 COX6A1-203ENST00000550009 572 ntTSL 211.64□□□□□ -0.552e-28■■■■□ 21.9
SUB1P53999 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.672e-28■■■■□ 21.9
SUB1P53999 IWS1-201ENST00000295321 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.696e-6■■■■□ 21.9
SUB1P53999 IWS1-203ENST00000412979 441 ntTSL 39.18□□□□□ -0.946e-6■■■■□ 21.9
SUB1P53999 IWS1-212ENST00000637187 1021 ntTSL 54.93□□□□□ -1.626e-6■■■■□ 21.9
SUB1P53999 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.064e-30■■■■□ 21.9
SUB1P53999 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.324e-30■■■■□ 21.9
SUB1P53999 EEF1A1-201ENST00000309268 2303 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.044e-30■■■■□ 21.9
SUB1P53999 EEF1A1-207ENST00000490569 1802 ntTSL 56.73□□□□□ -1.334e-30■■■■□ 21.9
SUB1P53999 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.15□□□□□ -1.744e-30■■■■□ 21.9
SUB1P53999 EEF1A1-208ENST00000491404 633 ntTSL 33.78□□□□□ -1.84e-30■■■■□ 21.9
SUB1P53999 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.67□□□□□ -1.824e-30■■■■□ 21.9
SUB1P53999 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.022e-8■■■■□ 21.9
SUB1P53999 IVNS1ABP-204ENST00000459929 3657 ntTSL 510.29□□□□□ -0.762e-8■■■■□ 21.9
SUB1P53999 IVNS1ABP-206ENST00000475046 1816 ntTSL 24.29□□□□□ -1.722e-8■■■■□ 21.9
SUB1P53999 IVNS1ABP-207ENST00000480769 3776 ntTSL 1 (best)3.13□□□□□ -1.912e-8■■■■□ 21.9
SUB1P53999 HNRNPA2B1-205ENST00000476233 1220 ntTSL 1 (best)4.56□□□□□ -1.687e-8■■■■□ 21.8
SUB1P53999 PCMT1-206ENST00000480010 377 ntTSL 52.01□□□□□ -2.099e-16■■■■□ 21.8
SUB1P53999 TMEM14C-203ENST00000467415 899 ntTSL 311.07□□□□□ -0.642e-8■■■■□ 21.8
SUB1P53999 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.672e-8■■■■□ 21.8
SUB1P53999 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.722e-8■■■■□ 21.8
SUB1P53999 CD63-213ENST00000552164 845 ntTSL 213.97□□□□□ -0.171e-7■■■■□ 21.8
SUB1P53999 CD63-211ENST00000551173 788 ntTSL 313.06□□□□□ -0.321e-7■■■■□ 21.8
SUB1P53999 CD63-203ENST00000546457 607 ntTSL 210.63□□□□□ -0.711e-7■■■■□ 21.8
SUB1P53999 TTC3-216ENST00000479930 8998 ntTSL 1 (best)8.5□□□□□ -1.052e-7■■■■□ 21.8
SUB1P53999 TTC3-202ENST00000355666 7712 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.072e-7■■■■□ 21.8
SUB1P53999 TTC3-215ENST00000476784 7425 ntTSL 26.25□□□□□ -1.412e-7■■■■□ 21.8
SUB1P53999 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.462e-7■■■■□ 21.8
SUB1P53999 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.642e-7■■■■□ 21.8
SUB1P53999 POLR2A-209ENST00000617998 6751 ntTSL 1 (best)9.85□□□□□ -0.835e-26■■■■□ 21.8
SUB1P53999 ATAD2-201ENST00000287394 5565 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.669e-10■■■■□ 21.8
SUB1P53999 ATAD2-202ENST00000517666 4995 ntTSL 510.81□□□□□ -0.689e-10■■■■□ 21.8
SUB1P53999 ATAD2-205ENST00000521903 5143 ntTSL 1 (best) BASIC7.48□□□□□ -1.219e-10■■■■□ 21.8
SUB1P53999 ATAD2-203ENST00000519124 4650 ntTSL 1 (best)5.45□□□□□ -1.549e-10■■■■□ 21.8
SUB1P53999 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.528e-8■■■■□ 21.8
SUB1P53999 SERP1-203ENST00000479209 3934 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.878e-8■■■■□ 21.8
SUB1P53999 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.331e-6■■■■□ 21.8
SUB1P53999 FADS2-215ENST00000574708 385 ntTSL 3 BASIC11.15□□□□□ -0.621e-6■■■■□ 21.8
SUB1P53999 FEN1-202ENST00000535307 768 ntTSL 29.55□□□□□ -0.881e-6■■■■□ 21.8
SUB1P53999 CCNG1-209ENST00000511490 418 ntTSL 512.33□□□□□ -0.441e-13■■■■□ 21.7
SUB1P53999 AHNAK-208ENST00000533365 584 ntAPPRIS ALT2 TSL 514.88□□□□□ -0.031e-6■■■■□ 21.7
SUB1P53999 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.511e-6■■■■□ 21.7
SUB1P53999 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.48□□□□□ -1.691e-6■■■■□ 21.7
SUB1P53999 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.452e-6■■■■□ 21.7
SUB1P53999 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.162e-6■■■■□ 21.7
SUB1P53999 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.162e-6■■■■□ 21.7
SUB1P53999 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.162e-6■■■■□ 21.7
SUB1P53999 DIAPH1-205ENST00000448451 2102 ntTSL 211.41□□□□□ -0.582e-6■■■■□ 21.7
SUB1P53999 DIAPH1-208ENST00000476339 2606 ntTSL 28.85□□□□□ -0.992e-6■■■■□ 21.7
SUB1P53999 ATIC-204ENST00000427397 1046 ntTSL 514.24□□□□□ -0.131e-6■■■■□ 21.7
SUB1P53999 ATIC-209ENST00000446622 615 ntTSL 33.3□□□□□ -1.881e-6■■■■□ 21.7
SUB1P53999 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.034e-11■■■■□ 21.7
SUB1P53999 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.134e-11■■■■□ 21.7
SUB1P53999 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.06□□□□□ -0.484e-11■■■■□ 21.7
SUB1P53999 C11orf98-203ENST00000532786 774 ntTSL 211.9□□□□□ -0.54e-11■■■■□ 21.7
SUB1P53999 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.574e-11■■■■□ 21.7
SUB1P53999 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.674e-11■■■■□ 21.7
SUB1P53999 LBHD1-203ENST00000415855 821 ntAPPRIS ALT2 TSL 310.18□□□□□ -0.784e-11■■■■□ 21.7
SUB1P53999 LBHD1-204ENST00000431002 2915 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.94e-11■■■■□ 21.7
SUB1P53999 CBX5-202ENST00000439541 1832 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.161e-6■■■■□ 21.7
SUB1P53999 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.561e-6■■■■□ 21.7
SUB1P53999 CARS-208ENST00000466442 2671 ntTSL 214.25□□□□□ -0.133e-10■■■■□ 21.7
SUB1P53999 CARS-209ENST00000470221 2466 ntTSL 214.08□□□□□ -0.163e-10■■■■□ 21.7
SUB1P53999 CARS-210ENST00000484484 1151 ntTSL 58.06□□□□□ -1.123e-10■■■■□ 21.7
SUB1P53999 PARK7-208ENST00000493373 624 ntTSL 510.14□□□□□ -0.792e-7■■■■□ 21.7
SUB1P53999 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC12.37□□□□□ -0.438e-7■■■■□ 21.6
SUB1P53999 CCNG1-210ENST00000511683 1071 ntTSL 26.37□□□□□ -1.398e-7■■■■□ 21.6
SUB1P53999 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.54□□□□□ -0.241e-6■■■■□ 21.6
SUB1P53999 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.261e-6■■■■□ 21.6
SUB1P53999 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.3□□□□□ -1.47e-7■■■■□ 21.6
SUB1P53999 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.75□□□□□ -1.497e-7■■■■□ 21.6
Retrieved 100 of 11,644 protein–RNA pairs in 115.1 ms