RNA–Protein interactions for RNA: ENST00000480010.1

PCMT1-206, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

TSL 5

Gene PCMT1, Length 377 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-206ENST00000480010 AEBP2Q6ZN18 517 aaPredicted RBP28.08■■■□□ 2.09
PCMT1-206ENST00000480010 CHIC1Q5VXU3 224 aa26.18■■□□□ 1.78
PCMT1-206ENST00000480010 SENP3Q9H4L4 574 aaPredicted RBP23.85■■□□□ 1.41
PCMT1-206ENST00000480010 PHF23Q9BUL5 403 aaPredicted RBP23.55■■□□□ 1.36
PCMT1-206ENST00000480010 FOXD1Q16676 465 aa22.38■■□□□ 1.17
PCMT1-206ENST00000480010 POTEDQ86YR6 584 aa21.24■□□□□ 0.99
PCMT1-206ENST00000480010 MSH5O43196 834 aa20.96■□□□□ 0.95
PCMT1-206ENST00000480010 PIAS4Q8N2W9 510 aaPredicted RBP20.78■□□□□ 0.92
PCMT1-206ENST00000480010 PPP6R1Q9UPN7 881 aa20.69■□□□□ 0.9
PCMT1-206ENST00000480010 PLPPR3Q6T4P5 718 aa20.68■□□□□ 0.9
PCMT1-206ENST00000480010 ADRA2BP18089 450 aa20.58■□□□□ 0.89
PCMT1-206ENST00000480010 MAPK8IP2Q13387 824 aaPredicted RBP19.05■□□□□ 0.64
PCMT1-206ENST00000480010 DMRT2Q9Y5R5 561 aa18.89■□□□□ 0.61
PCMT1-206ENST00000480010 SCAF1Q9H7N4 1312 aaKnown RBP18.61■□□□□ 0.57
PCMT1-206ENST00000480010 CACNB1Q02641 598 aaPredicted RBP18.28■□□□□ 0.52
PCMT1-206ENST00000480010 DCAF8L1A6NGE4 600 aa18.15■□□□□ 0.5
PCMT1-206ENST00000480010 PPP4R3CPQ6ZMV5 832 aa18.14■□□□□ 0.49
PCMT1-206ENST00000480010 HOXD11P31277 338 aaPredicted RBP18.03■□□□□ 0.48
PCMT1-206ENST00000480010 RNF39Q9H2S5 420 aa17.92■□□□□ 0.46
PCMT1-206ENST00000480010 CNKSR2Q8WXI2 1034 aa17.83■□□□□ 0.44
PCMT1-206ENST00000480010 RNF216Q9NWF9 866 aaPredicted RBP17.77■□□□□ 0.44
PCMT1-206ENST00000480010 C1QBPQ07021 282 aaKnown RBP17.57■□□□□ 0.4
PCMT1-206ENST00000480010 DNAJC5BQ9UF47 199 aa17.38■□□□□ 0.37
PCMT1-206ENST00000480010 NCBP3Q53F19 620 aaKnown RBP17.2■□□□□ 0.34
PCMT1-206ENST00000480010 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.17■□□□□ 0.34
PCMT1-206ENST00000480010 NPM3O75607 178 aaKnown RBP17.1■□□□□ 0.33
PCMT1-206ENST00000480010 U3KPZ7 1027 aaPredicted RBP16.84■□□□□ 0.29
PCMT1-206ENST00000480010 SPINK5Q9NQ38 1064 aaPredicted RBP16.75■□□□□ 0.27
PCMT1-206ENST00000480010 DSG3P32926 999 aa16.67■□□□□ 0.26
PCMT1-206ENST00000480010 CAPN15O75808 1086 aa16.65■□□□□ 0.26
PCMT1-206ENST00000480010 POTEHQ6S545 545 aa16.54■□□□□ 0.24
PCMT1-206ENST00000480010 SLC4A2P04920 1241 aa16.47■□□□□ 0.23
PCMT1-206ENST00000480010 KCNA4P22459 653 aa16.47■□□□□ 0.23
PCMT1-206ENST00000480010 TRHP20396 242 aaPredicted RBP16.32■□□□□ 0.2
PCMT1-206ENST00000480010 ABCB7O75027 752 aa16.31■□□□□ 0.2
PCMT1-206ENST00000480010 ZNF219Q9P2Y4 722 aaPredicted RBP16.17■□□□□ 0.18
PCMT1-206ENST00000480010 APLP2Q06481 763 aa16.1■□□□□ 0.17
PCMT1-206ENST00000480010 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.03■□□□□ 0.16
PCMT1-206ENST00000480010 HNRNPUL2Q1KMD3 747 aaKnown RBP16.03■□□□□ 0.16
PCMT1-206ENST00000480010 SAMD1Q6SPF0 538 aaPredicted RBP15.97■□□□□ 0.15
PCMT1-206ENST00000480010 RBM42Q9BTD8 480 aaKnown RBP15.79■□□□□ 0.12
PCMT1-206ENST00000480010 POLA2Q14181 598 aa15.78■□□□□ 0.12
PCMT1-206ENST00000480010 MYCNP04198 464 aaPredicted RBP15.75■□□□□ 0.11
PCMT1-206ENST00000480010 CHRDL2Q6WN34 429 aa15.69■□□□□ 0.1
PCMT1-206ENST00000480010 ATF5Q9Y2D1 282 aaPredicted RBP15.57■□□□□ 0.08
PCMT1-206ENST00000480010 AKT1S1Q96B36 256 aa15.39■□□□□ 0.05
PCMT1-206ENST00000480010 SLC4A1APQ9BWU0 796 aaKnown RBP15.39■□□□□ 0.05
PCMT1-206ENST00000480010 FOXD4L1Q9NU39 408 aa15.39■□□□□ 0.05
PCMT1-206ENST00000480010 OSCARQ8IYS5 282 aa15.33■□□□□ 0.04
PCMT1-206ENST00000480010 REM2Q8IYK8 340 aaPredicted RBP15.31■□□□□ 0.04
PCMT1-206ENST00000480010 SP7Q8TDD2 431 aaPredicted RBP15.3■□□□□ 0.04
PCMT1-206ENST00000480010 ZBTB12Q9Y330 459 aaPredicted RBP15.29■□□□□ 0.04
PCMT1-206ENST00000480010 PIP4P2Q8N4L2 257 aa15.28■□□□□ 0.04
PCMT1-206ENST00000480010 PITPNM1O00562 1244 aa15.19■□□□□ 0.02
PCMT1-206ENST00000480010 ZBTB22O15209 634 aa15.19■□□□□ 0.02
PCMT1-206ENST00000480010 FXR2P51116 673 aaKnown RBP eCLIP15.09■□□□□ 0.01
PCMT1-206ENST00000480010 HAX1O00165 279 aa15.06■□□□□ 0
PCMT1-206ENST00000480010 EVX2Q03828 476 aa14.97□□□□□ -0.01
PCMT1-206ENST00000480010 ATXN8OSP0DMR3 200 aa14.89□□□□□ -0.03
PCMT1-206ENST00000480010 SPDYE2BA6NHP3 402 aa14.86□□□□□ -0.03
PCMT1-206ENST00000480010 SPDYE6P0CI01 402 aa14.86□□□□□ -0.03
PCMT1-206ENST00000480010 SPDYE2Q495Y8 402 aa14.86□□□□□ -0.03
PCMT1-206ENST00000480010 MKRN4PQ13434 485 aaPredicted RBP14.81□□□□□ -0.04
PCMT1-206ENST00000480010 FBLN2P98095 1184 aa14.8□□□□□ -0.04
PCMT1-206ENST00000480010 PRKAR2AP13861 404 aaKnown RBP14.76□□□□□ -0.05
PCMT1-206ENST00000480010 CLEC11AQ9Y240 323 aa14.75□□□□□ -0.05
PCMT1-206ENST00000480010 SPDYE1Q8NFV5 336 aaPredicted RBP14.68□□□□□ -0.06
PCMT1-206ENST00000480010 SSUH2Q9Y2M2 353 aa14.67□□□□□ -0.06
PCMT1-206ENST00000480010 ZNF692Q9BU19 519 aaPredicted RBP14.64□□□□□ -0.07
PCMT1-206ENST00000480010 C19orf67A6NJJ6 358 aa14.63□□□□□ -0.07
PCMT1-206ENST00000480010 CHADLQ6NUI6 762 aa14.58□□□□□ -0.08
PCMT1-206ENST00000480010 GABBR2O75899 941 aa14.52□□□□□ -0.09
PCMT1-206ENST00000480010 PABPN1Q86U42 306 aaKnown RBP eCLIP14.45□□□□□ -0.1
PCMT1-206ENST00000480010 PRR29P0C7W0 189 aa14.4□□□□□ -0.1
PCMT1-206ENST00000480010 LHX8Q68G74 356 aa14.36□□□□□ -0.11
PCMT1-206ENST00000480010 POTEIP0CG38 1075 aa14.28□□□□□ -0.12
PCMT1-206ENST00000480010 CD44P16070 742 aaKnown RBP14.25□□□□□ -0.13
PCMT1-206ENST00000480010 FARP1Q9Y4F1 1045 aaPredicted RBP14.24□□□□□ -0.13
PCMT1-206ENST00000480010 CSRNP3Q8WYN3 585 aa14.08□□□□□ -0.16
PCMT1-206ENST00000480010 CREBZFQ9NS37 354 aa14.03□□□□□ -0.16
PCMT1-206ENST00000480010 ZNF579Q8NAF0 562 aaKnown RBP14□□□□□ -0.17
PCMT1-206ENST00000480010 ZRANB1Q9UGI0 708 aa14□□□□□ -0.17
PCMT1-206ENST00000480010 DCBLD2Q96PD2 775 aa13.99□□□□□ -0.17
PCMT1-206ENST00000480010 CLCN6P51797 869 aa13.96□□□□□ -0.17
PCMT1-206ENST00000480010 GALR2O43603 387 aaPredicted RBP13.94□□□□□ -0.18
PCMT1-206ENST00000480010 STAG3Q9UJ98 1225 aa13.85□□□□□ -0.19
PCMT1-206ENST00000480010 PHF12Q96QT6 1004 aa13.84□□□□□ -0.19
PCMT1-206ENST00000480010 SPDYE4A6NLX3 237 aa13.82□□□□□ -0.2
PCMT1-206ENST00000480010 POTEB2H3BUK9 544 aa13.82□□□□□ -0.2
PCMT1-206ENST00000480010 OTUD5Q96G74 571 aa13.79□□□□□ -0.2
PCMT1-206ENST00000480010 PLSCR2Q9NRY7 297 aa13.78□□□□□ -0.2
PCMT1-206ENST00000480010 MNX1P50219 401 aaPredicted RBP13.75□□□□□ -0.21
PCMT1-206ENST00000480010 PELP1Q8IZL8 1130 aaKnown RBP13.73□□□□□ -0.21
PCMT1-206ENST00000480010 EHMT2Q96KQ7 1210 aa13.7□□□□□ -0.22
PCMT1-206ENST00000480010 PAK3O75914 559 aaPredicted RBP13.69□□□□□ -0.22
PCMT1-206ENST00000480010 NPM1P06748 294 aaKnown RBP eCLIP13.63□□□□□ -0.23
PCMT1-206ENST00000480010 MS4A3Q96HJ5 214 aa13.62□□□□□ -0.23
PCMT1-206ENST00000480010 POTEJP0CG39 1038 aa13.56□□□□□ -0.24
PCMT1-206ENST00000480010 ASTLQ6HA08 431 aaPredicted RBP13.56□□□□□ -0.24
PCMT1-206ENST00000480010 POTEMA6NI47 508 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms