Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SSR4P51571 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SSR4P51571 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SSR4P51571 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.91■□□□□ 0.62
SSR4P51571 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SSR4P51571 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SSR4P51571 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SSR4P51571 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.91■□□□□ 0.62
SSR4P51571 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SSR4P51571 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.91■□□□□ 0.62
SSR4P51571 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.91■□□□□ 0.62
SSR4P51571 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SSR4P51571 MYC-209ENST00000641252 345 ntBASIC18.91■□□□□ 0.62
SSR4P51571 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SSR4P51571 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SSR4P51571 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SSR4P51571 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SSR4P51571 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.91■□□□□ 0.62
SSR4P51571 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SSR4P51571 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SSR4P51571 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
SSR4P51571 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.91■□□□□ 0.62
SSR4P51571 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SSR4P51571 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SSR4P51571 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SSR4P51571 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.9■□□□□ 0.62
SSR4P51571 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SSR4P51571 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SSR4P51571 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.9■□□□□ 0.62
SSR4P51571 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SSR4P51571 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SSR4P51571 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SSR4P51571 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SSR4P51571 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SSR4P51571 PGM5P4-201ENST00000421970 445 ntBASIC18.9■□□□□ 0.62
SSR4P51571 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SSR4P51571 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.9■□□□□ 0.62
SSR4P51571 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.9■□□□□ 0.62
SSR4P51571 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.9■□□□□ 0.62
SSR4P51571 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SSR4P51571 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SSR4P51571 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SSR4P51571 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SSR4P51571 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SSR4P51571 AL024507.2-201ENST00000606070 2574 ntBASIC18.89■□□□□ 0.62
SSR4P51571 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
SSR4P51571 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SSR4P51571 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SSR4P51571 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
SSR4P51571 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSR4P51571 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSR4P51571 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.89■□□□□ 0.61
SSR4P51571 RNA5SP413-201ENST00000516373 109 ntBASIC18.89■□□□□ 0.61
SSR4P51571 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.89■□□□□ 0.61
SSR4P51571 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSR4P51571 AC083880.1-201ENST00000608266 535 ntBASIC18.89■□□□□ 0.61
SSR4P51571 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSR4P51571 AC011484.1-201ENST00000377652 1995 ntBASIC18.89■□□□□ 0.61
SSR4P51571 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SSR4P51571 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSR4P51571 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSR4P51571 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.89■□□□□ 0.61
SSR4P51571 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SSR4P51571 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSR4P51571 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SSR4P51571 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
SSR4P51571 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.89■□□□□ 0.61
SSR4P51571 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SSR4P51571 LINC00565-201ENST00000562710 2331 ntBASIC18.89■□□□□ 0.61
SSR4P51571 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSR4P51571 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSR4P51571 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSR4P51571 AL049796.1-201ENST00000565336 1766 ntBASIC18.88■□□□□ 0.61
SSR4P51571 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.88■□□□□ 0.61
SSR4P51571 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
SSR4P51571 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSR4P51571 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SSR4P51571 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSR4P51571 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.88■□□□□ 0.61
SSR4P51571 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.88■□□□□ 0.61
SSR4P51571 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.88■□□□□ 0.61
SSR4P51571 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
SSR4P51571 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.88■□□□□ 0.61
SSR4P51571 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSR4P51571 AC087633.2-202ENST00000565166 1439 ntBASIC18.88■□□□□ 0.61
SSR4P51571 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSR4P51571 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SSR4P51571 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSR4P51571 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SSR4P51571 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSR4P51571 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SSR4P51571 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSR4P51571 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSR4P51571 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSR4P51571 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSR4P51571 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSR4P51571 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSR4P51571 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSR4P51571 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.87■□□□□ 0.61
SSR4P51571 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms