Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TUBP50607 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TUBP50607 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TUBP50607 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TUBP50607 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
TUBP50607 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TUBP50607 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
TUBP50607 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
TUBP50607 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.65■■□□□ 1.06
TUBP50607 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TUBP50607 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.65■■□□□ 1.06
TUBP50607 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.65■■□□□ 1.06
TUBP50607 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.65■■□□□ 1.06
TUBP50607 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.65■■□□□ 1.06
TUBP50607 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.65■■□□□ 1.06
TUBP50607 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.65■■□□□ 1.06
TUBP50607 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.65■■□□□ 1.06
TUBP50607 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.65■■□□□ 1.06
TUBP50607 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
TUBP50607 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TUBP50607 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
TUBP50607 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
TUBP50607 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.65■■□□□ 1.06
TUBP50607 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
TUBP50607 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.64■■□□□ 1.06
TUBP50607 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TUBP50607 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TUBP50607 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TUBP50607 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TUBP50607 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
TUBP50607 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.64■■□□□ 1.05
TUBP50607 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TUBP50607 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.05
TUBP50607 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
TUBP50607 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
TUBP50607 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
TUBP50607 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TUBP50607 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
TUBP50607 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TUBP50607 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.63■■□□□ 1.05
TUBP50607 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TUBP50607 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TUBP50607 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.63■■□□□ 1.05
TUBP50607 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
TUBP50607 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.63■■□□□ 1.05
TUBP50607 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.63■■□□□ 1.05
TUBP50607 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.63■■□□□ 1.05
TUBP50607 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TUBP50607 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.63■■□□□ 1.05
TUBP50607 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TUBP50607 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
TUBP50607 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.63■■□□□ 1.05
TUBP50607 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
TUBP50607 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
TUBP50607 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.62■■□□□ 1.05
TUBP50607 BX276092.2-201ENST00000417668 665 ntBASIC21.62■■□□□ 1.05
TUBP50607 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.62■■□□□ 1.05
TUBP50607 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.62■■□□□ 1.05
TUBP50607 AC098934.4-201ENST00000564127 592 ntBASIC21.62■■□□□ 1.05
TUBP50607 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.62■■□□□ 1.05
TUBP50607 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TUBP50607 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.62■■□□□ 1.05
TUBP50607 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TUBP50607 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TUBP50607 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TUBP50607 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TUBP50607 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
TUBP50607 AC007322.3-201ENST00000426526 701 ntBASIC21.61■■□□□ 1.05
TUBP50607 KRT18P6-201ENST00000555540 1265 ntBASIC21.61■■□□□ 1.05
TUBP50607 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TUBP50607 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.61■■□□□ 1.05
TUBP50607 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.61■■□□□ 1.05
TUBP50607 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
TUBP50607 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TUBP50607 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TUBP50607 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TUBP50607 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
TUBP50607 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.6■■□□□ 1.05
TUBP50607 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.6■■□□□ 1.05
TUBP50607 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.6■■□□□ 1.05
TUBP50607 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TUBP50607 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TUBP50607 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TUBP50607 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TUBP50607 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
TUBP50607 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TUBP50607 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.6■■□□□ 1.05
TUBP50607 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TUBP50607 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
TUBP50607 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TUBP50607 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
TUBP50607 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TUBP50607 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
TUBP50607 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TUBP50607 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TUBP50607 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TUBP50607 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TUBP50607 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.59■■□□□ 1.05
TUBP50607 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.59■■□□□ 1.05
TUBP50607 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms