Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MDH1P40925 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
MDH1P40925 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MDH1P40925 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MDH1P40925 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
MDH1P40925 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MDH1P40925 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MDH1P40925 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
MDH1P40925 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MDH1P40925 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MDH1P40925 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
MDH1P40925 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
MDH1P40925 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MDH1P40925 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MDH1P40925 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MDH1P40925 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.67■□□□□ 0.9
MDH1P40925 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.67■□□□□ 0.9
MDH1P40925 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
MDH1P40925 AC021242.3-201ENST00000607598 1377 ntBASIC20.67■□□□□ 0.9
MDH1P40925 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MDH1P40925 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
MDH1P40925 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
MDH1P40925 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MDH1P40925 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MDH1P40925 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
MDH1P40925 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MDH1P40925 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.66■□□□□ 0.9
MDH1P40925 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.66■□□□□ 0.9
MDH1P40925 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
MDH1P40925 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.66■□□□□ 0.9
MDH1P40925 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MDH1P40925 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MDH1P40925 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.66■□□□□ 0.9
MDH1P40925 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MDH1P40925 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MDH1P40925 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MDH1P40925 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MDH1P40925 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.66■□□□□ 0.9
MDH1P40925 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.66■□□□□ 0.9
MDH1P40925 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MDH1P40925 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MDH1P40925 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MDH1P40925 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MDH1P40925 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.65■□□□□ 0.9
MDH1P40925 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MDH1P40925 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MDH1P40925 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MDH1P40925 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MDH1P40925 AC092720.2-201ENST00000602388 1665 ntBASIC20.65■□□□□ 0.9
MDH1P40925 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.65■□□□□ 0.9
MDH1P40925 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.65■□□□□ 0.9
MDH1P40925 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.65■□□□□ 0.9
MDH1P40925 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.65■□□□□ 0.9
MDH1P40925 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.65■□□□□ 0.9
MDH1P40925 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MDH1P40925 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MDH1P40925 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MDH1P40925 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.64■□□□□ 0.89
MDH1P40925 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.64■□□□□ 0.89
MDH1P40925 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
MDH1P40925 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
MDH1P40925 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.64■□□□□ 0.89
MDH1P40925 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
MDH1P40925 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MDH1P40925 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.64■□□□□ 0.89
MDH1P40925 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
MDH1P40925 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.64■□□□□ 0.89
MDH1P40925 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
MDH1P40925 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MDH1P40925 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
MDH1P40925 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.63■□□□□ 0.89
MDH1P40925 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MDH1P40925 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.63■□□□□ 0.89
MDH1P40925 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MDH1P40925 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
MDH1P40925 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
MDH1P40925 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.63■□□□□ 0.89
MDH1P40925 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MDH1P40925 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
MDH1P40925 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.63■□□□□ 0.89
MDH1P40925 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.63■□□□□ 0.89
MDH1P40925 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MDH1P40925 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MDH1P40925 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
MDH1P40925 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.63■□□□□ 0.89
MDH1P40925 AC093503.3-201ENST00000624917 2352 ntBASIC20.63■□□□□ 0.89
MDH1P40925 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
MDH1P40925 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
MDH1P40925 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
MDH1P40925 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MDH1P40925 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MDH1P40925 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MDH1P40925 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
MDH1P40925 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.62■□□□□ 0.89
MDH1P40925 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
MDH1P40925 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MDH1P40925 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
MDH1P40925 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MDH1P40925 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.62■□□□□ 0.89
MDH1P40925 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms