Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.77■□□□□ 0.28
CEACAM3P40198 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.77■□□□□ 0.28
CEACAM3P40198 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
CEACAM3P40198 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CEACAM3P40198 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CEACAM3P40198 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CEACAM3P40198 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.77■□□□□ 0.27
CEACAM3P40198 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
CEACAM3P40198 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.77■□□□□ 0.27
CEACAM3P40198 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CEACAM3P40198 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.77■□□□□ 0.27
CEACAM3P40198 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
CEACAM3P40198 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CEACAM3P40198 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CEACAM3P40198 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CEACAM3P40198 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CEACAM3P40198 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CEACAM3P40198 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CEACAM3P40198 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CEACAM3P40198 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.76■□□□□ 0.27
CEACAM3P40198 AC091799.1-201ENST00000422823 811 ntBASIC16.76■□□□□ 0.27
CEACAM3P40198 AC007322.3-201ENST00000426526 701 ntBASIC16.76■□□□□ 0.27
CEACAM3P40198 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.76■□□□□ 0.27
CEACAM3P40198 AC008694.1-202ENST00000636953 945 ntBASIC16.76■□□□□ 0.27
CEACAM3P40198 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CEACAM3P40198 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CEACAM3P40198 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.76■□□□□ 0.27
CEACAM3P40198 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.76■□□□□ 0.27
CEACAM3P40198 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CEACAM3P40198 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CEACAM3P40198 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CEACAM3P40198 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CEACAM3P40198 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CEACAM3P40198 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.76■□□□□ 0.27
CEACAM3P40198 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CEACAM3P40198 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CEACAM3P40198 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.75■□□□□ 0.27
CEACAM3P40198 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CEACAM3P40198 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CEACAM3P40198 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.75■□□□□ 0.27
CEACAM3P40198 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CEACAM3P40198 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CEACAM3P40198 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CEACAM3P40198 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CEACAM3P40198 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.75■□□□□ 0.27
CEACAM3P40198 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CEACAM3P40198 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.75■□□□□ 0.27
CEACAM3P40198 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.75■□□□□ 0.27
CEACAM3P40198 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.75■□□□□ 0.27
CEACAM3P40198 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.75■□□□□ 0.27
CEACAM3P40198 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CEACAM3P40198 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.75■□□□□ 0.27
CEACAM3P40198 AC069236.1-201ENST00000604339 616 ntBASIC16.75■□□□□ 0.27
CEACAM3P40198 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CEACAM3P40198 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.75■□□□□ 0.27
CEACAM3P40198 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CEACAM3P40198 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CEACAM3P40198 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CEACAM3P40198 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CEACAM3P40198 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CEACAM3P40198 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CEACAM3P40198 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CEACAM3P40198 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
CEACAM3P40198 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CEACAM3P40198 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CEACAM3P40198 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CEACAM3P40198 AC121338.2-201ENST00000622535 1744 ntBASIC16.74■□□□□ 0.27
CEACAM3P40198 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CEACAM3P40198 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CEACAM3P40198 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CEACAM3P40198 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CEACAM3P40198 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.74■□□□□ 0.27
CEACAM3P40198 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CEACAM3P40198 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.74■□□□□ 0.27
CEACAM3P40198 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.74■□□□□ 0.27
CEACAM3P40198 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.74■□□□□ 0.27
CEACAM3P40198 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CEACAM3P40198 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CEACAM3P40198 AC011484.1-201ENST00000377652 1995 ntBASIC16.74■□□□□ 0.27
CEACAM3P40198 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CEACAM3P40198 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.74■□□□□ 0.27
CEACAM3P40198 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CEACAM3P40198 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CEACAM3P40198 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CEACAM3P40198 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.74■□□□□ 0.27
CEACAM3P40198 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CEACAM3P40198 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CEACAM3P40198 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CEACAM3P40198 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CEACAM3P40198 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CEACAM3P40198 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CEACAM3P40198 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CEACAM3P40198 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CEACAM3P40198 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
CEACAM3P40198 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CEACAM3P40198 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CEACAM3P40198 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CEACAM3P40198 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CEACAM3P40198 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CEACAM3P40198 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms