Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 AL031602.1-201ENST00000633169 911 ntBASIC18.41■□□□□ 0.54
SOX6P35712 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SOX6P35712 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SOX6P35712 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SOX6P35712 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SOX6P35712 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SOX6P35712 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.41■□□□□ 0.54
SOX6P35712 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SOX6P35712 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SOX6P35712 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SOX6P35712 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SOX6P35712 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SOX6P35712 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SOX6P35712 AP000974.1-201ENST00000623909 2387 ntBASIC18.4■□□□□ 0.54
SOX6P35712 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SOX6P35712 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SOX6P35712 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SOX6P35712 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
SOX6P35712 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.4■□□□□ 0.54
SOX6P35712 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
SOX6P35712 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SOX6P35712 AC137630.3-201ENST00000607245 391 ntBASIC18.4■□□□□ 0.54
SOX6P35712 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.4■□□□□ 0.54
SOX6P35712 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SOX6P35712 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SOX6P35712 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SOX6P35712 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SOX6P35712 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SOX6P35712 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SOX6P35712 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.4■□□□□ 0.54
SOX6P35712 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SOX6P35712 TNXA-203ENST00000507684 2038 ntBASIC18.4■□□□□ 0.54
SOX6P35712 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SOX6P35712 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SOX6P35712 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
SOX6P35712 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.39■□□□□ 0.54
SOX6P35712 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.39■□□□□ 0.54
SOX6P35712 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SOX6P35712 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SOX6P35712 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SOX6P35712 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SOX6P35712 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SOX6P35712 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SOX6P35712 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SOX6P35712 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SOX6P35712 KRT125P-201ENST00000546827 989 ntBASIC18.39■□□□□ 0.53
SOX6P35712 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.39■□□□□ 0.53
SOX6P35712 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SOX6P35712 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.39■□□□□ 0.53
SOX6P35712 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SOX6P35712 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.39■□□□□ 0.53
SOX6P35712 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SOX6P35712 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SOX6P35712 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SOX6P35712 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.38■□□□□ 0.53
SOX6P35712 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SOX6P35712 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SOX6P35712 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SOX6P35712 AC003102.1-202ENST00000563394 1796 ntBASIC18.38■□□□□ 0.53
SOX6P35712 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SOX6P35712 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SOX6P35712 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.38■□□□□ 0.53
SOX6P35712 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SOX6P35712 Z92544.1-202ENST00000571933 1220 ntBASIC18.38■□□□□ 0.53
SOX6P35712 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.38■□□□□ 0.53
SOX6P35712 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.38■□□□□ 0.53
SOX6P35712 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SOX6P35712 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SOX6P35712 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SOX6P35712 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.38■□□□□ 0.53
SOX6P35712 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SOX6P35712 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SOX6P35712 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SOX6P35712 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SOX6P35712 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SOX6P35712 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SOX6P35712 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SOX6P35712 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.37■□□□□ 0.53
SOX6P35712 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
SOX6P35712 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
SOX6P35712 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SOX6P35712 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SOX6P35712 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SOX6P35712 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.37■□□□□ 0.53
SOX6P35712 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.37■□□□□ 0.53
SOX6P35712 AL034346.1-201ENST00000568244 1277 ntBASIC18.37■□□□□ 0.53
SOX6P35712 AL035685.1-201ENST00000636663 812 ntBASIC18.37■□□□□ 0.53
SOX6P35712 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SOX6P35712 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SOX6P35712 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SOX6P35712 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SOX6P35712 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SOX6P35712 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SOX6P35712 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.37■□□□□ 0.53
SOX6P35712 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SOX6P35712 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.37■□□□□ 0.53
SOX6P35712 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SOX6P35712 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SOX6P35712 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SOX6P35712 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms