Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
RORAP35398 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.56■□□□□ 0.72
RORAP35398 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RORAP35398 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RORAP35398 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RORAP35398 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.55■□□□□ 0.72
RORAP35398 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RORAP35398 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.55■□□□□ 0.72
RORAP35398 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RORAP35398 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RORAP35398 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RORAP35398 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RORAP35398 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RORAP35398 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RORAP35398 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RORAP35398 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RORAP35398 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RORAP35398 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RORAP35398 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RORAP35398 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.55■□□□□ 0.72
RORAP35398 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.55■□□□□ 0.72
RORAP35398 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.55■□□□□ 0.72
RORAP35398 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RORAP35398 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RORAP35398 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.54■□□□□ 0.72
RORAP35398 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RORAP35398 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RORAP35398 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RORAP35398 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
RORAP35398 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RORAP35398 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RORAP35398 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RORAP35398 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.54■□□□□ 0.72
RORAP35398 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RORAP35398 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
RORAP35398 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.54■□□□□ 0.72
RORAP35398 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.54■□□□□ 0.72
RORAP35398 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RORAP35398 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RORAP35398 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RORAP35398 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RORAP35398 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RORAP35398 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RORAP35398 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RORAP35398 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.54■□□□□ 0.72
RORAP35398 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RORAP35398 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RORAP35398 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RORAP35398 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RORAP35398 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RORAP35398 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RORAP35398 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RORAP35398 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RORAP35398 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RORAP35398 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RORAP35398 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RORAP35398 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.53■□□□□ 0.72
RORAP35398 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.53■□□□□ 0.72
RORAP35398 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.53■□□□□ 0.72
RORAP35398 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.53■□□□□ 0.72
RORAP35398 AL589743.5-201ENST00000616611 1050 ntBASIC19.53■□□□□ 0.72
RORAP35398 ITM2C-210ENST00000620962 501 ntBASIC19.53■□□□□ 0.72
RORAP35398 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RORAP35398 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RORAP35398 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.53■□□□□ 0.72
RORAP35398 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RORAP35398 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RORAP35398 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.53■□□□□ 0.72
RORAP35398 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RORAP35398 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.53■□□□□ 0.72
RORAP35398 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RORAP35398 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RORAP35398 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RORAP35398 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RORAP35398 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RORAP35398 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RORAP35398 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RORAP35398 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RORAP35398 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.52■□□□□ 0.72
RORAP35398 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RORAP35398 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.52■□□□□ 0.72
RORAP35398 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.52■□□□□ 0.72
RORAP35398 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RORAP35398 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RORAP35398 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RORAP35398 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.52■□□□□ 0.72
RORAP35398 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RORAP35398 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RORAP35398 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RORAP35398 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RORAP35398 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
RORAP35398 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RORAP35398 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.51■□□□□ 0.71
RORAP35398 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RORAP35398 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
RORAP35398 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RORAP35398 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RORAP35398 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.51■□□□□ 0.71
RORAP35398 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RORAP35398 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms