Protein–RNA interactions for Protein: P30511

HLA-F, HLA class I histocompatibility antigen, alpha chain F, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-FP30511 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-FP30511 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.99■□□□□ 0.95
HLA-FP30511 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-FP30511 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-FP30511 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-FP30511 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-FP30511 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
HLA-FP30511 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-FP30511 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-FP30511 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-FP30511 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-FP30511 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-FP30511 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.98■□□□□ 0.95
HLA-FP30511 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.98■□□□□ 0.95
HLA-FP30511 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-FP30511 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-FP30511 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.98■□□□□ 0.95
HLA-FP30511 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-FP30511 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
HLA-FP30511 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
HLA-FP30511 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
HLA-FP30511 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
HLA-FP30511 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.97■□□□□ 0.95
HLA-FP30511 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-FP30511 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.97■□□□□ 0.95
HLA-FP30511 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-FP30511 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-FP30511 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-FP30511 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.97■□□□□ 0.95
HLA-FP30511 AC087633.2-202ENST00000565166 1439 ntBASIC20.97■□□□□ 0.95
HLA-FP30511 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
HLA-FP30511 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-FP30511 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
HLA-FP30511 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.97■□□□□ 0.95
HLA-FP30511 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-FP30511 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.97■□□□□ 0.95
HLA-FP30511 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.97■□□□□ 0.95
HLA-FP30511 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.97■□□□□ 0.95
HLA-FP30511 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
HLA-FP30511 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-FP30511 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.97■□□□□ 0.95
HLA-FP30511 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-FP30511 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-FP30511 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
HLA-FP30511 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.97■□□□□ 0.95
HLA-FP30511 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-FP30511 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-FP30511 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-FP30511 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-FP30511 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
HLA-FP30511 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-FP30511 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
HLA-FP30511 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.96■□□□□ 0.95
HLA-FP30511 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
HLA-FP30511 ESRRAP1-201ENST00000400596 1257 ntBASIC20.96■□□□□ 0.95
HLA-FP30511 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.96■□□□□ 0.95
HLA-FP30511 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.96■□□□□ 0.95
HLA-FP30511 ITM2C-210ENST00000620962 501 ntBASIC20.96■□□□□ 0.95
HLA-FP30511 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.96■□□□□ 0.95
HLA-FP30511 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.96■□□□□ 0.95
HLA-FP30511 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-FP30511 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
HLA-FP30511 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
HLA-FP30511 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.96■□□□□ 0.95
HLA-FP30511 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
HLA-FP30511 AC011484.1-201ENST00000377652 1995 ntBASIC20.96■□□□□ 0.95
HLA-FP30511 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-FP30511 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-FP30511 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.95■□□□□ 0.94
HLA-FP30511 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-FP30511 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-FP30511 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.95■□□□□ 0.94
HLA-FP30511 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.95■□□□□ 0.94
HLA-FP30511 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.95■□□□□ 0.94
HLA-FP30511 UNC93B5-201ENST00000530315 699 ntBASIC20.95■□□□□ 0.94
HLA-FP30511 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.95■□□□□ 0.94
HLA-FP30511 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.95■□□□□ 0.94
HLA-FP30511 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-FP30511 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-FP30511 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-FP30511 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-FP30511 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-FP30511 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
HLA-FP30511 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.95■□□□□ 0.94
HLA-FP30511 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-FP30511 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.95■□□□□ 0.94
HLA-FP30511 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-FP30511 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-FP30511 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-FP30511 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-FP30511 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-FP30511 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-FP30511 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-FP30511 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.94■□□□□ 0.94
HLA-FP30511 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.94■□□□□ 0.94
HLA-FP30511 HLA-B-256ENST00000639848 1089 ntBASIC20.94■□□□□ 0.94
HLA-FP30511 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.94■□□□□ 0.94
HLA-FP30511 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-FP30511 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
HLA-FP30511 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms