Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
PTX3P26022 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTX3P26022 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTX3P26022 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PTX3P26022 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTX3P26022 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTX3P26022 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTX3P26022 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTX3P26022 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
PTX3P26022 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PTX3P26022 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.71■□□□□ 0.75
PTX3P26022 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTX3P26022 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.71■□□□□ 0.75
PTX3P26022 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.71■□□□□ 0.75
PTX3P26022 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.71■□□□□ 0.75
PTX3P26022 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.71■□□□□ 0.75
PTX3P26022 MIR5787-201ENST00000611784 55 ntBASIC19.71■□□□□ 0.75
PTX3P26022 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PTX3P26022 AC007225.1-201ENST00000566331 1836 ntBASIC19.71■□□□□ 0.75
PTX3P26022 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTX3P26022 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTX3P26022 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTX3P26022 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PTX3P26022 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTX3P26022 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTX3P26022 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.7■□□□□ 0.74
PTX3P26022 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.7■□□□□ 0.74
PTX3P26022 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTX3P26022 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.7■□□□□ 0.74
PTX3P26022 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.7■□□□□ 0.74
PTX3P26022 AC091799.1-201ENST00000422823 811 ntBASIC19.7■□□□□ 0.74
PTX3P26022 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
PTX3P26022 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.7■□□□□ 0.74
PTX3P26022 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.7■□□□□ 0.74
PTX3P26022 AC137761.2-201ENST00000561729 223 ntBASIC19.7■□□□□ 0.74
PTX3P26022 AC145350.3-201ENST00000569033 163 ntBASIC19.7■□□□□ 0.74
PTX3P26022 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PTX3P26022 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
PTX3P26022 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTX3P26022 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.7■□□□□ 0.74
PTX3P26022 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.7■□□□□ 0.74
PTX3P26022 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.7■□□□□ 0.74
PTX3P26022 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTX3P26022 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTX3P26022 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PTX3P26022 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.69■□□□□ 0.74
PTX3P26022 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.69■□□□□ 0.74
PTX3P26022 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTX3P26022 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PTX3P26022 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTX3P26022 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTX3P26022 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTX3P26022 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PTX3P26022 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTX3P26022 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTX3P26022 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTX3P26022 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTX3P26022 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.69■□□□□ 0.74
PTX3P26022 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTX3P26022 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTX3P26022 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.69■□□□□ 0.74
PTX3P26022 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTX3P26022 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTX3P26022 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTX3P26022 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTX3P26022 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTX3P26022 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
PTX3P26022 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.68■□□□□ 0.74
PTX3P26022 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PTX3P26022 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTX3P26022 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PTX3P26022 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTX3P26022 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTX3P26022 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTX3P26022 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTX3P26022 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PTX3P26022 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PTX3P26022 FEM1AP1-201ENST00000431297 1995 ntBASIC19.67■□□□□ 0.74
PTX3P26022 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.67■□□□□ 0.74
PTX3P26022 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTX3P26022 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.67■□□□□ 0.74
PTX3P26022 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTX3P26022 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.67■□□□□ 0.74
PTX3P26022 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTX3P26022 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTX3P26022 AC027702.1-201ENST00000563810 1770 ntBASIC19.67■□□□□ 0.74
PTX3P26022 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTX3P26022 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTX3P26022 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTX3P26022 FP700111.2-201ENST00000619190 1892 ntBASIC19.67■□□□□ 0.74
PTX3P26022 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTX3P26022 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTX3P26022 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTX3P26022 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTX3P26022 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTX3P26022 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTX3P26022 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTX3P26022 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTX3P26022 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTX3P26022 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms