Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 PAU18YLL064C 363 nt1.22□□□□□ -2.21
CDC39P25655 YML084WYML084W 309 nt1.22□□□□□ -2.21
CDC39P25655 PAU6YNR076W 363 nt1.22□□□□□ -2.21
CDC39P25655 PAU24YBR301W 363 nt1.22□□□□□ -2.21
CDC39P25655 STB4YMR019W 2850 nt1.22□□□□□ -2.21
CDC39P25655 MFA1YDR461W 111 nt1.22□□□□□ -2.21
CDC39P25655 STF2YGR008C 255 nt1.22□□□□□ -2.21
CDC39P25655 MSL1YIR009W 336 nt1.22□□□□□ -2.21
CDC39P25655 YLR379WYLR379W 375 nt1.22□□□□□ -2.21
CDC39P25655 FYV8YGR196C 2454 nt1.22□□□□□ -2.21
CDC39P25655 FKS1YLR342W 5631 nt1.22□□□□□ -2.21
CDC39P25655 MSH3YCR092C 3057 nt1.21□□□□□ -2.22
CDC39P25655 DNF3YMR162C 4971 nt1.21□□□□□ -2.22
CDC39P25655 IST2YBR086C 2841 nt1.21□□□□□ -2.22
CDC39P25655 ATG10YLL042C 504 nt1.21□□□□□ -2.22
CDC39P25655 YMR144WYMR144W 1029 nt1.21□□□□□ -2.22
CDC39P25655 USO1YDL058W 5373 nt1.21□□□□□ -2.22
CDC39P25655 YLR035C-AYLR035C-A 3468 nt1.21□□□□□ -2.22
CDC39P25655 EST3YIL009C-A 546 nt1.21□□□□□ -2.22
CDC39P25655 PHS1YJL097W 654 nt1.21□□□□□ -2.22
CDC39P25655 UTP21YLR409C 2820 nt1.21□□□□□ -2.22
CDC39P25655 CTR9YOL145C 3234 nt1.21□□□□□ -2.22
CDC39P25655 BFR1YOR198C 1413 nt1.2□□□□□ -2.22
CDC39P25655 YDL041WYDL041W 354 nt1.2□□□□□ -2.22
CDC39P25655 SHE2YKL130C 741 nt1.2□□□□□ -2.22
CDC39P25655 YNL171CYNL171C 369 nt1.2□□□□□ -2.22
CDC39P25655 ATX1YNL259C 222 nt1.2□□□□□ -2.22
CDC39P25655 LDH1YBR204C 1128 nt1.2□□□□□ -2.22
CDC39P25655 GNT1YOR320C 1476 nt1.2□□□□□ -2.22
CDC39P25655 SHR3YDL212W 633 nt1.19□□□□□ -2.22
CDC39P25655 RAM2YKL019W 951 nt1.19□□□□□ -2.22
CDC39P25655 MNE1YOR350C 1992 nt1.19□□□□□ -2.22
CDC39P25655 SXM1YDR395W 2835 nt1.19□□□□□ -2.22
CDC39P25655 YDL062WYDL062W 426 nt1.19□□□□□ -2.22
CDC39P25655 SNC1YAL030W 354 nt1.19□□□□□ -2.22
CDC39P25655 CCE1YKL011C 1062 nt1.19□□□□□ -2.22
CDC39P25655 RIF2YLR453C 1188 nt1.19□□□□□ -2.22
CDC39P25655 MER1YNL210W 813 nt1.19□□□□□ -2.22
CDC39P25655 MIX23YBL107C 591 nt1.19□□□□□ -2.22
CDC39P25655 SRP1YNL189W 1629 nt1.19□□□□□ -2.22
CDC39P25655 UBP11YKR098C 2154 nt1.19□□□□□ -2.22
CDC39P25655 SHE9YDR393W 1371 nt1.19□□□□□ -2.22
CDC39P25655 RRI1YDL216C 1323 nt1.18□□□□□ -2.22
CDC39P25655 YNR066CYNR066C 1311 nt1.18□□□□□ -2.22
CDC39P25655 YCR015CYCR015C 954 nt1.18□□□□□ -2.22
CDC39P25655 YER147C-AYER147C-A 411 nt1.18□□□□□ -2.22
CDC39P25655 YIL142C-AYIL142C-A 333 nt1.18□□□□□ -2.22
CDC39P25655 NCE101YJL205C 162 nt1.18□□□□□ -2.22
CDC39P25655 RPB11YOL005C 363 nt1.18□□□□□ -2.22
CDC39P25655 CHC1YGL206C 4962 nt1.18□□□□□ -2.22
CDC39P25655 PRP6YBR055C 2700 nt1.18□□□□□ -2.22
CDC39P25655 RIT1YMR283C 1542 nt1.18□□□□□ -2.22
CDC39P25655 RNH70YGR276C 1662 nt1.18□□□□□ -2.22
CDC39P25655 YER121WYER121W 345 nt1.18□□□□□ -2.22
CDC39P25655 YGL118CYGL118C 438 nt1.18□□□□□ -2.22
CDC39P25655 YGL258W-AYGL258W-A 234 nt1.18□□□□□ -2.22
CDC39P25655 RPS30BYOR182C 192 nt1.18□□□□□ -2.22
CDC39P25655 FRK1YPL141C 2598 nt1.17□□□□□ -2.22
CDC39P25655 MVB12YGR206W 306 nt1.17□□□□□ -2.22
CDC39P25655 URA5YML106W 681 nt1.17□□□□□ -2.22
CDC39P25655 BAG7YOR134W 1230 nt1.17□□□□□ -2.22
CDC39P25655 NUR1YDL089W 1455 nt1.17□□□□□ -2.22
CDC39P25655 YDR170W-AYDR170W-A 1323 nt1.17□□□□□ -2.22
CDC39P25655 YNL284C-AYNL284C-A 1323 nt1.17□□□□□ -2.22
CDC39P25655 SLD5YDR489W 885 nt1.16□□□□□ -2.22
CDC39P25655 ACB1YGR037C 264 nt1.16□□□□□ -2.22
CDC39P25655 YMR052C-AYMR052C-A 366 nt1.16□□□□□ -2.22
CDC39P25655 RUF20RUF20 443 nt1.16□□□□□ -2.22
CDC39P25655 PEX15YOL044W 1152 nt1.16□□□□□ -2.22
CDC39P25655 YPR177CYPR177C 372 nt1.16□□□□□ -2.22
CDC39P25655 ESC2YDR363W 1371 nt1.16□□□□□ -2.22
CDC39P25655 PRK1YIL095W 2433 nt1.16□□□□□ -2.22
CDC39P25655 PDS5YMR076C 3834 nt1.16□□□□□ -2.22
CDC39P25655 NSE3YDR288W 912 nt1.16□□□□□ -2.22
CDC39P25655 YLR053CYLR053C 327 nt1.16□□□□□ -2.22
CDC39P25655 PEX34YCL056C 435 nt1.16□□□□□ -2.22
CDC39P25655 HSL1YKL101W 4557 nt1.16□□□□□ -2.22
CDC39P25655 AGC1YPR021C 2709 nt1.16□□□□□ -2.22
CDC39P25655 SLF1YDR515W 1344 nt1.15□□□□□ -2.22
CDC39P25655 YLR422WYLR422W 5799 nt1.15□□□□□ -2.22
CDC39P25655 RGI1YER067W 486 nt1.15□□□□□ -2.23
CDC39P25655 CTK2YJL006C 972 nt1.15□□□□□ -2.23
CDC39P25655 YBR277CYBR277C 402 nt1.15□□□□□ -2.23
CDC39P25655 NOP12YOL041C 1380 nt1.15□□□□□ -2.23
CDC39P25655 YJR039WYJR039W 3366 nt1.15□□□□□ -2.23
CDC39P25655 APL2YKL135C 2181 nt1.15□□□□□ -2.23
CDC39P25655 PSO2YMR137C 1986 nt1.15□□□□□ -2.23
CDC39P25655 EAF7YNL136W 1278 nt1.15□□□□□ -2.23
CDC39P25655 YPL238CYPL238C 390 nt1.15□□□□□ -2.23
CDC39P25655 LAA1YJL207C 6045 nt1.15□□□□□ -2.23
CDC39P25655 TFC8YPL007C 1767 nt1.14□□□□□ -2.23
CDC39P25655 UBR1YGR184C 5853 nt1.14□□□□□ -2.23
CDC39P25655 YPT52YKR014C 705 nt1.14□□□□□ -2.23
CDC39P25655 ATG38YLR211C 681 nt1.14□□□□□ -2.23
CDC39P25655 SUT2YPR009W 807 nt1.14□□□□□ -2.23
CDC39P25655 CSH1YBR161W 1131 nt1.14□□□□□ -2.23
CDC39P25655 PIG2YIL045W 1617 nt1.14□□□□□ -2.23
CDC39P25655 PGD1YGL025C 1194 nt1.13□□□□□ -2.23
CDC39P25655 YHR212CYHR212C 336 nt1.13□□□□□ -2.23
CDC39P25655 VPS25YJR102C 609 nt1.13□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 60.1 ms