Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 SYT1YPR095C 3681 nt3.92□□□□□ -1.78
MSH3P25336 YDL180WYDL180W 1644 nt3.92□□□□□ -1.78
MSH3P25336 PFK26YIL107C 2484 nt3.92□□□□□ -1.78
MSH3P25336 RPS21BYJL136C 264 nt3.92□□□□□ -1.78
MSH3P25336 RPL37AYLR185W 267 nt3.92□□□□□ -1.78
MSH3P25336 YAK1YJL141C 2424 nt3.92□□□□□ -1.78
MSH3P25336 STE14YDR410C 720 nt3.91□□□□□ -1.78
MSH3P25336 YER039C-AYER039C-A 219 nt3.91□□□□□ -1.78
MSH3P25336 NDT80YHR124W 1884 nt3.91□□□□□ -1.78
MSH3P25336 MRP8YKL142W 660 nt3.91□□□□□ -1.78
MSH3P25336 IMP4YNL075W 873 nt3.91□□□□□ -1.78
MSH3P25336 SLP1YOR154W 1764 nt3.91□□□□□ -1.78
MSH3P25336 YHR007C-AYHR007C-A 216 nt3.9□□□□□ -1.79
MSH3P25336 MSL1YIR009W 336 nt3.9□□□□□ -1.79
MSH3P25336 ANB1YJR047C 474 nt3.9□□□□□ -1.79
MSH3P25336 HHF1YBR009C 312 nt3.9□□□□□ -1.79
MSH3P25336 YPL238CYPL238C 390 nt3.9□□□□□ -1.79
MSH3P25336 YBR137WYBR137W 540 nt3.9□□□□□ -1.79
MSH3P25336 MDM32YOR147W 1869 nt3.9□□□□□ -1.79
MSH3P25336 IES6YEL044W 501 nt3.89□□□□□ -1.79
MSH3P25336 BCD1YHR040W 1101 nt3.89□□□□□ -1.79
MSH3P25336 YJL202CYJL202C 348 nt3.89□□□□□ -1.79
MSH3P25336 YAL064W-BYAL064W-B 381 nt3.89□□□□□ -1.79
MSH3P25336 YOP1YPR028W 543 nt3.89□□□□□ -1.79
MSH3P25336 DPB11YJL090C 2295 nt3.89□□□□□ -1.79
MSH3P25336 GLC3YEL011W 2115 nt3.89□□□□□ -1.79
MSH3P25336 SPA2YLL021W 4401 nt3.89□□□□□ -1.79
MSH3P25336 DAN4YJR151C 3486 nt3.89□□□□□ -1.79
MSH3P25336 MUS81YDR386W 1899 nt3.88□□□□□ -1.79
MSH3P25336 ZDS2YML109W 2829 nt3.88□□□□□ -1.79
MSH3P25336 YDR183C-AYDR183C-A 258 nt3.88□□□□□ -1.79
MSH3P25336 AIM11YER093C-A 414 nt3.88□□□□□ -1.79
MSH3P25336 tW(UCA)QtW(UCA)Q 74 nt3.88□□□□□ -1.79
MSH3P25336 YJR023CYJR023C 402 nt3.88□□□□□ -1.79
MSH3P25336 YKL111CYKL111C 336 nt3.88□□□□□ -1.79
MSH3P25336 PRE8YML092C 753 nt3.88□□□□□ -1.79
MSH3P25336 NDD1YOR372C 1665 nt3.87□□□□□ -1.79
MSH3P25336 TRS120YDR407C 3870 nt3.87□□□□□ -1.79
MSH3P25336 RPC10YHR143W-A 213 nt3.87□□□□□ -1.79
MSH3P25336 tV(CAC)DtV(CAC)D 73 nt3.87□□□□□ -1.79
MSH3P25336 tV(CAC)HtV(CAC)H 73 nt3.87□□□□□ -1.79
MSH3P25336 YJR140W-AYJR140W-A 150 nt3.87□□□□□ -1.79
MSH3P25336 SRL3YKR091W 741 nt3.87□□□□□ -1.79
MSH3P25336 RPL23AYBL087C 414 nt3.87□□□□□ -1.79
MSH3P25336 RPS7AYOR096W 573 nt3.87□□□□□ -1.79
MSH3P25336 SSM4YIL030C 3960 nt3.87□□□□□ -1.79
MSH3P25336 FRQ1YDR373W 573 nt3.86□□□□□ -1.79
MSH3P25336 RMT2YDR465C 1239 nt3.86□□□□□ -1.79
MSH3P25336 IRC4YDR540C 540 nt3.86□□□□□ -1.79
MSH3P25336 CAJ1YER048C 1176 nt3.86□□□□□ -1.79
MSH3P25336 YER188C-AYER188C-A 300 nt3.86□□□□□ -1.79
MSH3P25336 PAU23YLR037C 375 nt3.86□□□□□ -1.79
MSH3P25336 FCF2YLR051C 654 nt3.86□□□□□ -1.79
MSH3P25336 YLR416CYLR416C 399 nt3.86□□□□□ -1.79
MSH3P25336 SHH3YMR118C 591 nt3.86□□□□□ -1.79
MSH3P25336 SSN8YNL025C 972 nt3.86□□□□□ -1.79
MSH3P25336 RPS8AYBL072C 603 nt3.86□□□□□ -1.79
MSH3P25336 SEC6YIL068C 2418 nt3.86□□□□□ -1.79
MSH3P25336 UBP5YER144C 2418 nt3.85□□□□□ -1.79
MSH3P25336 SMC3YJL074C 3693 nt3.85□□□□□ -1.79
MSH3P25336 TIF35YDR429C 825 nt3.85□□□□□ -1.79
MSH3P25336 USE1YGL098W 738 nt3.85□□□□□ -1.79
MSH3P25336 ISF1YMR081C 1017 nt3.85□□□□□ -1.79
MSH3P25336 RPN2YIL075C 2838 nt3.85□□□□□ -1.79
MSH3P25336 URB2YJR041C 3525 nt3.85□□□□□ -1.79
MSH3P25336 FAA2YER015W 2235 nt3.85□□□□□ -1.79
MSH3P25336 SNX41YDR425W 1878 nt3.84□□□□□ -1.79
MSH3P25336 YDL176WYDL176W 2127 nt3.84□□□□□ -1.79
MSH3P25336 YPR108W-AYPR108W-A 213 nt3.84□□□□□ -1.79
MSH3P25336 21S_rRNA21S_rRNA 3296 nt3.84□□□□□ -1.79
MSH3P25336 JIP5YPR169W 1479 nt3.84□□□□□ -1.8
MSH3P25336 KHA1YJL094C 2622 nt3.84□□□□□ -1.8
MSH3P25336 URA2YJL130C 6645 nt3.83□□□□□ -1.8
MSH3P25336 CPA2YJR109C 3357 nt3.83□□□□□ -1.8
MSH3P25336 YGL007C-AYGL007C-A 87 nt3.83□□□□□ -1.8
MSH3P25336 BAT1YHR208W 1182 nt3.83□□□□□ -1.8
MSH3P25336 TMA19YKL056C 504 nt3.83□□□□□ -1.8
MSH3P25336 PGA1YNL158W 597 nt3.83□□□□□ -1.8
MSH3P25336 YPL152W-AYPL152W-A 99 nt3.83□□□□□ -1.8
MSH3P25336 NUP60YAR002W 1620 nt3.83□□□□□ -1.8
MSH3P25336 CWC22YGR278W 1734 nt3.83□□□□□ -1.8
MSH3P25336 RPA135YPR010C 3612 nt3.82□□□□□ -1.8
MSH3P25336 RCY1YJL204C 2523 nt3.82□□□□□ -1.8
MSH3P25336 HMF1YER057C 390 nt3.82□□□□□ -1.8
MSH3P25336 YJL015CYJL015C 285 nt3.82□□□□□ -1.8
MSH3P25336 LSM8YJR022W 330 nt3.82□□□□□ -1.8
MSH3P25336 MDN1YLR106C 14733 nt3.82□□□□□ -1.8
MSH3P25336 SLA1YBL007C 3735 nt3.82□□□□□ -1.8
MSH3P25336 RPN1YHR027C 2982 nt3.81□□□□□ -1.8
MSH3P25336 ARG2YJL071W 1725 nt3.81□□□□□ -1.8
MSH3P25336 CCT7YJL111W 1653 nt3.81□□□□□ -1.8
MSH3P25336 YER107W-AYER107W-A 321 nt3.81□□□□□ -1.8
MSH3P25336 YFL063WYFL063W 456 nt3.81□□□□□ -1.8
MSH3P25336 YFR056CYFR056C 369 nt3.81□□□□□ -1.8
MSH3P25336 YGR265WYGR265W 411 nt3.81□□□□□ -1.8
MSH3P25336 URM1YIL008W 300 nt3.81□□□□□ -1.8
MSH3P25336 IRC23YOR044W 474 nt3.81□□□□□ -1.8
MSH3P25336 ISU1YPL135W 498 nt3.81□□□□□ -1.8
MSH3P25336 YPR053CYPR053C 456 nt3.81□□□□□ -1.8
MSH3P25336 YBP1YBR216C 2025 nt3.81□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 29 ms