Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DPA1P20036 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DPA1P20036 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DPA1P20036 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
HLA-DPA1P20036 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.75■□□□□ 0.91
HLA-DPA1P20036 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DPA1P20036 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
HLA-DPA1P20036 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.75■□□□□ 0.91
HLA-DPA1P20036 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DPA1P20036 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DPA1P20036 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DPA1P20036 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DPA1P20036 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DPA1P20036 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DPA1P20036 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DPA1P20036 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.75■□□□□ 0.91
HLA-DPA1P20036 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.75■□□□□ 0.91
HLA-DPA1P20036 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.75■□□□□ 0.91
HLA-DPA1P20036 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DPA1P20036 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.75■□□□□ 0.91
HLA-DPA1P20036 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DPA1P20036 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HLA-DPA1P20036 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.75■□□□□ 0.91
HLA-DPA1P20036 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DPA1P20036 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.75■□□□□ 0.91
HLA-DPA1P20036 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.75■□□□□ 0.91
HLA-DPA1P20036 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DPA1P20036 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.75■□□□□ 0.91
HLA-DPA1P20036 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DPA1P20036 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DPA1P20036 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DPA1P20036 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DPA1P20036 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DPA1P20036 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DPA1P20036 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.74■□□□□ 0.91
HLA-DPA1P20036 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
HLA-DPA1P20036 AL162412.1-201ENST00000567129 965 ntBASIC20.74■□□□□ 0.91
HLA-DPA1P20036 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.74■□□□□ 0.91
HLA-DPA1P20036 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.74■□□□□ 0.91
HLA-DPA1P20036 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.74■□□□□ 0.91
HLA-DPA1P20036 AL591742.1-201ENST00000604433 565 ntBASIC20.74■□□□□ 0.91
HLA-DPA1P20036 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.74■□□□□ 0.91
HLA-DPA1P20036 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DPA1P20036 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DPA1P20036 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DPA1P20036 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
HLA-DPA1P20036 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DPA1P20036 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DPA1P20036 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DPA1P20036 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
HLA-DPA1P20036 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.73■□□□□ 0.91
HLA-DPA1P20036 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DPA1P20036 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DPA1P20036 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DPA1P20036 AC027702.1-201ENST00000563810 1770 ntBASIC20.73■□□□□ 0.91
HLA-DPA1P20036 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DPA1P20036 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DPA1P20036 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.73■□□□□ 0.91
HLA-DPA1P20036 DUX4L16-201ENST00000555130 1264 ntBASIC20.73■□□□□ 0.91
HLA-DPA1P20036 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.73■□□□□ 0.91
HLA-DPA1P20036 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
HLA-DPA1P20036 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DPA1P20036 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DPA1P20036 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.73■□□□□ 0.91
HLA-DPA1P20036 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.73■□□□□ 0.91
HLA-DPA1P20036 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.73■□□□□ 0.91
HLA-DPA1P20036 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DPA1P20036 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DPA1P20036 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DPA1P20036 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
HLA-DPA1P20036 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.72■□□□□ 0.91
HLA-DPA1P20036 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DPA1P20036 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
HLA-DPA1P20036 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DPA1P20036 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DPA1P20036 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DPA1P20036 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DPA1P20036 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
HLA-DPA1P20036 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DPA1P20036 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.72■□□□□ 0.91
HLA-DPA1P20036 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
HLA-DPA1P20036 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DPA1P20036 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
HLA-DPA1P20036 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
HLA-DPA1P20036 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.71■□□□□ 0.91
HLA-DPA1P20036 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DPA1P20036 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.71■□□□□ 0.91
HLA-DPA1P20036 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
HLA-DPA1P20036 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DPA1P20036 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
HLA-DPA1P20036 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DPA1P20036 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
HLA-DPA1P20036 FAM21FP-204ENST00000608637 956 ntBASIC20.71■□□□□ 0.91
HLA-DPA1P20036 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DPA1P20036 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.71■□□□□ 0.91
HLA-DPA1P20036 AC007225.1-201ENST00000566331 1836 ntBASIC20.71■□□□□ 0.91
HLA-DPA1P20036 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DPA1P20036 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DPA1P20036 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DPA1P20036 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms