Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
ERCC2P18074 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ERCC2P18074 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC2P18074 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC2P18074 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC2P18074 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ERCC2P18074 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.19■□□□□ 0.98
ERCC2P18074 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC2P18074 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.18■□□□□ 0.98
ERCC2P18074 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
ERCC2P18074 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.18■□□□□ 0.98
ERCC2P18074 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC2P18074 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.18■□□□□ 0.98
ERCC2P18074 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.18■□□□□ 0.98
ERCC2P18074 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.18■□□□□ 0.98
ERCC2P18074 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC2P18074 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC2P18074 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC2P18074 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC2P18074 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
ERCC2P18074 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.18■□□□□ 0.98
ERCC2P18074 AC080038.1-201ENST00000611274 1154 ntBASIC21.18■□□□□ 0.98
ERCC2P18074 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ERCC2P18074 AC231657.2-201ENST00000624556 255 ntBASIC21.18■□□□□ 0.98
ERCC2P18074 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
ERCC2P18074 AC068338.2-201ENST00000563278 1430 ntBASIC21.18■□□□□ 0.98
ERCC2P18074 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC2P18074 AC007225.1-201ENST00000566331 1836 ntBASIC21.18■□□□□ 0.98
ERCC2P18074 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.18■□□□□ 0.98
ERCC2P18074 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC2P18074 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ERCC2P18074 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.17■□□□□ 0.98
ERCC2P18074 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.17■□□□□ 0.98
ERCC2P18074 AC016405.3-201ENST00000607710 860 ntBASIC21.17■□□□□ 0.98
ERCC2P18074 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.17■□□□□ 0.98
ERCC2P18074 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ERCC2P18074 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.17■□□□□ 0.98
ERCC2P18074 FP700111.2-201ENST00000619190 1892 ntBASIC21.17■□□□□ 0.98
ERCC2P18074 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
ERCC2P18074 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ERCC2P18074 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ERCC2P18074 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ERCC2P18074 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ERCC2P18074 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.16■□□□□ 0.98
ERCC2P18074 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ERCC2P18074 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
ERCC2P18074 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ERCC2P18074 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
ERCC2P18074 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.16■□□□□ 0.98
ERCC2P18074 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.16■□□□□ 0.98
ERCC2P18074 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.16■□□□□ 0.98
ERCC2P18074 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ERCC2P18074 AC007322.1-201ENST00000426983 750 ntBASIC21.16■□□□□ 0.98
ERCC2P18074 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.16■□□□□ 0.98
ERCC2P18074 AL162412.1-201ENST00000567129 965 ntBASIC21.16■□□□□ 0.98
ERCC2P18074 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.16■□□□□ 0.98
ERCC2P18074 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.16■□□□□ 0.98
ERCC2P18074 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.16■□□□□ 0.98
ERCC2P18074 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.16■□□□□ 0.98
ERCC2P18074 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ERCC2P18074 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ERCC2P18074 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.16■□□□□ 0.98
ERCC2P18074 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
ERCC2P18074 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ERCC2P18074 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ERCC2P18074 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ERCC2P18074 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
ERCC2P18074 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
ERCC2P18074 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.15■□□□□ 0.98
ERCC2P18074 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ERCC2P18074 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ERCC2P18074 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
ERCC2P18074 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
ERCC2P18074 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.15■□□□□ 0.98
ERCC2P18074 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.15■□□□□ 0.98
ERCC2P18074 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.15■□□□□ 0.98
ERCC2P18074 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
ERCC2P18074 FAM21FP-204ENST00000608637 956 ntBASIC21.15■□□□□ 0.98
ERCC2P18074 AC073111.5-205ENST00000641717 521 ntBASIC21.15■□□□□ 0.98
ERCC2P18074 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ERCC2P18074 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ERCC2P18074 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.14■□□□□ 0.98
ERCC2P18074 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
ERCC2P18074 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
ERCC2P18074 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ERCC2P18074 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ERCC2P18074 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ERCC2P18074 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
ERCC2P18074 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.14■□□□□ 0.97
ERCC2P18074 AC092666.2-201ENST00000613287 246 ntBASIC21.14■□□□□ 0.97
ERCC2P18074 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.14■□□□□ 0.97
ERCC2P18074 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
ERCC2P18074 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
ERCC2P18074 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
ERCC2P18074 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
ERCC2P18074 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ERCC2P18074 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC2P18074 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
ERCC2P18074 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.13■□□□□ 0.97
ERCC2P18074 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms