Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 P4HB-223ENST00000576390 439 ntTSL 4 BASIC35.74■■■■□ 3.31
CFTRP13569 AC145285.6-201ENST00000604632 637 ntBASIC35.74■■■■□ 3.31
CFTRP13569 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC35.74■■■■□ 3.31
CFTRP13569 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC35.74■■■■□ 3.31
CFTRP13569 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
CFTRP13569 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
CFTRP13569 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
CFTRP13569 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC35.74■■■■□ 3.31
CFTRP13569 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC35.74■■■■□ 3.31
CFTRP13569 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC35.74■■■■□ 3.31
CFTRP13569 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC35.74■■■■□ 3.31
CFTRP13569 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC35.73■■■■□ 3.31
CFTRP13569 AC092865.7-201ENST00000641832 219 ntBASIC35.73■■■■□ 3.31
CFTRP13569 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC35.73■■■■□ 3.31
CFTRP13569 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC35.73■■■■□ 3.31
CFTRP13569 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC35.73■■■■□ 3.31
CFTRP13569 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC35.73■■■■□ 3.31
CFTRP13569 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC35.73■■■■□ 3.31
CFTRP13569 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
CFTRP13569 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC35.73■■■■□ 3.31
CFTRP13569 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC35.73■■■■□ 3.31
CFTRP13569 RER1-204ENST00000378518 522 ntTSL 3 BASIC35.73■■■■□ 3.31
CFTRP13569 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
CFTRP13569 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC35.72■■■■□ 3.31
CFTRP13569 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC35.72■■■■□ 3.31
CFTRP13569 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
CFTRP13569 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC35.72■■■■□ 3.31
CFTRP13569 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC35.72■■■■□ 3.31
CFTRP13569 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC35.72■■■■□ 3.31
CFTRP13569 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
CFTRP13569 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC35.72■■■■□ 3.31
CFTRP13569 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
CFTRP13569 COMT-203ENST00000403184 2217 ntTSL 2 BASIC35.71■■■■□ 3.31
CFTRP13569 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
CFTRP13569 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC35.71■■■■□ 3.31
CFTRP13569 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC35.7■■■■□ 3.31
CFTRP13569 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC35.7■■■■□ 3.31
CFTRP13569 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC35.7■■■■□ 3.31
CFTRP13569 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC35.7■■■■□ 3.31
CFTRP13569 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC35.7■■■■□ 3.31
CFTRP13569 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC35.7■■■■□ 3.31
CFTRP13569 NT5C-211ENST00000582170 653 ntTSL 3 BASIC35.7■■■■□ 3.31
CFTRP13569 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC35.7■■■■□ 3.31
CFTRP13569 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC35.7■■■■□ 3.31
CFTRP13569 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC35.7■■■■□ 3.3
CFTRP13569 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.3
CFTRP13569 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC35.7■■■■□ 3.3
CFTRP13569 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC35.69■■■■□ 3.3
CFTRP13569 SAPCD2P4-201ENST00000424595 1171 ntBASIC35.69■■■■□ 3.3
CFTRP13569 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC35.69■■■■□ 3.3
CFTRP13569 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC35.69■■■■□ 3.3
CFTRP13569 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC35.69■■■■□ 3.3
CFTRP13569 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC35.69■■■■□ 3.3
CFTRP13569 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC35.69■■■■□ 3.3
CFTRP13569 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
CFTRP13569 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC35.69■■■■□ 3.3
CFTRP13569 PKM-204ENST00000449901 2526 ntTSL 2 BASIC35.69■■■■□ 3.3
CFTRP13569 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC35.68■■■■□ 3.3
CFTRP13569 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC35.68■■■■□ 3.3
CFTRP13569 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC35.68■■■■□ 3.3
CFTRP13569 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC35.68■■■■□ 3.3
CFTRP13569 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
CFTRP13569 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC35.68■■■■□ 3.3
CFTRP13569 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC35.68■■■■□ 3.3
CFTRP13569 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC35.67■■■■□ 3.3
CFTRP13569 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC35.67■■■■□ 3.3
CFTRP13569 AF186192.3-201ENST00000583427 947 ntBASIC35.67■■■■□ 3.3
CFTRP13569 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC35.67■■■■□ 3.3
CFTRP13569 BRWD1-AS2-201ENST00000603064 1028 ntBASIC35.67■■■■□ 3.3
CFTRP13569 Six3os1_6.1-201ENST00000620790 196 ntBASIC35.67■■■■□ 3.3
CFTRP13569 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC35.67■■■■□ 3.3
CFTRP13569 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC35.67■■■■□ 3.3
CFTRP13569 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC35.66■■■■□ 3.3
CFTRP13569 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC35.66■■■■□ 3.3
CFTRP13569 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC35.66■■■■□ 3.3
CFTRP13569 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
CFTRP13569 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC35.66■■■■□ 3.3
CFTRP13569 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC35.66■■■■□ 3.3
CFTRP13569 MMP23A-201ENST00000234610 1017 ntBASIC35.66■■■■□ 3.3
CFTRP13569 MIR6786-201ENST00000616843 113 ntBASIC35.66■■■■□ 3.3
CFTRP13569 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC35.66■■■■□ 3.3
CFTRP13569 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
CFTRP13569 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC35.66■■■■□ 3.3
CFTRP13569 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC35.66■■■■□ 3.3
CFTRP13569 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC35.65■■■■□ 3.3
CFTRP13569 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
CFTRP13569 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
CFTRP13569 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
CFTRP13569 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC35.65■■■■□ 3.3
CFTRP13569 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC35.65■■■■□ 3.3
CFTRP13569 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC35.65■■■■□ 3.3
CFTRP13569 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC35.65■■■■□ 3.3
CFTRP13569 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
CFTRP13569 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC35.64■■■■□ 3.3
CFTRP13569 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
CFTRP13569 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC35.64■■■■□ 3.3
CFTRP13569 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC35.64■■■■□ 3.3
CFTRP13569 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC35.64■■■■□ 3.3
CFTRP13569 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC35.63■■■■□ 3.29
CFTRP13569 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC35.63■■■■□ 3.29
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms