Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBCP0CG48 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18■□□□□ 0.47
UBCP0CG48 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
UBCP0CG48 AC061975.6-201ENST00000579045 1553 ntBASIC18■□□□□ 0.47
UBCP0CG48 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18■□□□□ 0.47
UBCP0CG48 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
UBCP0CG48 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18■□□□□ 0.47
UBCP0CG48 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18■□□□□ 0.47
UBCP0CG48 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
UBCP0CG48 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
UBCP0CG48 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18■□□□□ 0.47
UBCP0CG48 POU5F1P4-201ENST00000413175 1085 ntBASIC18■□□□□ 0.47
UBCP0CG48 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18■□□□□ 0.47
UBCP0CG48 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBCP0CG48 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
UBCP0CG48 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
UBCP0CG48 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
UBCP0CG48 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18■□□□□ 0.47
UBCP0CG48 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
UBCP0CG48 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBCP0CG48 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBCP0CG48 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBCP0CG48 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBCP0CG48 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBCP0CG48 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBCP0CG48 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
UBCP0CG48 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBCP0CG48 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBCP0CG48 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBCP0CG48 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBCP0CG48 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.99■□□□□ 0.47
UBCP0CG48 TPRG1LP1-201ENST00000598702 760 ntBASIC17.99■□□□□ 0.47
UBCP0CG48 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBCP0CG48 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.99■□□□□ 0.47
UBCP0CG48 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
UBCP0CG48 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBCP0CG48 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.99■□□□□ 0.47
UBCP0CG48 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.99■□□□□ 0.47
UBCP0CG48 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBCP0CG48 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBCP0CG48 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBCP0CG48 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.98■□□□□ 0.47
UBCP0CG48 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.98■□□□□ 0.47
UBCP0CG48 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.98■□□□□ 0.47
UBCP0CG48 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBCP0CG48 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBCP0CG48 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBCP0CG48 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.98■□□□□ 0.47
UBCP0CG48 AC110285.6-201ENST00000617652 491 ntBASIC17.98■□□□□ 0.47
UBCP0CG48 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBCP0CG48 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBCP0CG48 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBCP0CG48 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBCP0CG48 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBCP0CG48 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBCP0CG48 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.98■□□□□ 0.47
UBCP0CG48 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
UBCP0CG48 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBCP0CG48 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
UBCP0CG48 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.98■□□□□ 0.47
UBCP0CG48 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.98■□□□□ 0.47
UBCP0CG48 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBCP0CG48 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBCP0CG48 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.98■□□□□ 0.47
UBCP0CG48 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBCP0CG48 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBCP0CG48 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
UBCP0CG48 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.97■□□□□ 0.47
UBCP0CG48 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBCP0CG48 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.97■□□□□ 0.47
UBCP0CG48 KRT87P-202ENST00000534226 1464 ntBASIC17.97■□□□□ 0.47
UBCP0CG48 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.97■□□□□ 0.47
UBCP0CG48 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBCP0CG48 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
UBCP0CG48 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.97■□□□□ 0.47
UBCP0CG48 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBCP0CG48 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.97■□□□□ 0.47
UBCP0CG48 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBCP0CG48 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.97■□□□□ 0.47
UBCP0CG48 AL358852.1-201ENST00000623174 1268 ntBASIC17.97■□□□□ 0.47
UBCP0CG48 AL136967.2-201ENST00000623968 743 ntBASIC17.97■□□□□ 0.47
UBCP0CG48 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBCP0CG48 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBCP0CG48 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBCP0CG48 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBCP0CG48 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBCP0CG48 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.97■□□□□ 0.47
UBCP0CG48 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
UBCP0CG48 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBCP0CG48 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.97■□□□□ 0.47
UBCP0CG48 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.96■□□□□ 0.47
UBCP0CG48 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.96■□□□□ 0.47
UBCP0CG48 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBCP0CG48 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UBCP0CG48 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.96■□□□□ 0.47
UBCP0CG48 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBCP0CG48 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UBCP0CG48 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBCP0CG48 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.96■□□□□ 0.47
UBCP0CG48 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms