Protein–RNA interactions for Protein: P0C7M3

SFTA3, Surfactant-associated protein 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTA3P0C7M3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SFTA3P0C7M3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SFTA3P0C7M3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SFTA3P0C7M3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SFTA3P0C7M3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SFTA3P0C7M3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SFTA3P0C7M3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
SFTA3P0C7M3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.44■□□□□ 0.22
SFTA3P0C7M3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.44■□□□□ 0.22
SFTA3P0C7M3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SFTA3P0C7M3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SFTA3P0C7M3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SFTA3P0C7M3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SFTA3P0C7M3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC16.44■□□□□ 0.22
SFTA3P0C7M3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.44■□□□□ 0.22
SFTA3P0C7M3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.44■□□□□ 0.22
SFTA3P0C7M3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SFTA3P0C7M3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SFTA3P0C7M3 AC007225.1-201ENST00000566331 1836 ntBASIC16.44■□□□□ 0.22
SFTA3P0C7M3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
SFTA3P0C7M3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
SFTA3P0C7M3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SFTA3P0C7M3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SFTA3P0C7M3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SFTA3P0C7M3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.44■□□□□ 0.22
SFTA3P0C7M3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SFTA3P0C7M3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SFTA3P0C7M3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SFTA3P0C7M3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SFTA3P0C7M3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.43■□□□□ 0.22
SFTA3P0C7M3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.43■□□□□ 0.22
SFTA3P0C7M3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SFTA3P0C7M3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SFTA3P0C7M3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.43■□□□□ 0.22
SFTA3P0C7M3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SFTA3P0C7M3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SFTA3P0C7M3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SFTA3P0C7M3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SFTA3P0C7M3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SFTA3P0C7M3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC16.43■□□□□ 0.22
SFTA3P0C7M3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC16.43■□□□□ 0.22
SFTA3P0C7M3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SFTA3P0C7M3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SFTA3P0C7M3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.43■□□□□ 0.22
SFTA3P0C7M3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SFTA3P0C7M3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SFTA3P0C7M3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
SFTA3P0C7M3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SFTA3P0C7M3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SFTA3P0C7M3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SFTA3P0C7M3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.42■□□□□ 0.22
SFTA3P0C7M3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SFTA3P0C7M3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC16.42■□□□□ 0.22
SFTA3P0C7M3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SFTA3P0C7M3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.42■□□□□ 0.22
SFTA3P0C7M3 AC020763.4-201ENST00000623414 4170 ntBASIC16.42■□□□□ 0.22
SFTA3P0C7M3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SFTA3P0C7M3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC16.42■□□□□ 0.22
SFTA3P0C7M3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC16.42■□□□□ 0.22
SFTA3P0C7M3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SFTA3P0C7M3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC16.42■□□□□ 0.22
SFTA3P0C7M3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC16.42■□□□□ 0.22
SFTA3P0C7M3 AC022616.5-201ENST00000518796 181 ntBASIC16.42■□□□□ 0.22
SFTA3P0C7M3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC16.42■□□□□ 0.22
SFTA3P0C7M3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC16.42■□□□□ 0.22
SFTA3P0C7M3 AC011551.1-201ENST00000614101 683 ntBASIC16.42■□□□□ 0.22
SFTA3P0C7M3 AC074183.2-201ENST00000623112 922 ntBASIC16.42■□□□□ 0.22
SFTA3P0C7M3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SFTA3P0C7M3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SFTA3P0C7M3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SFTA3P0C7M3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.42■□□□□ 0.22
SFTA3P0C7M3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SFTA3P0C7M3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC16.42■□□□□ 0.22
SFTA3P0C7M3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SFTA3P0C7M3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SFTA3P0C7M3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.42■□□□□ 0.22
SFTA3P0C7M3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SFTA3P0C7M3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SFTA3P0C7M3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.42■□□□□ 0.22
SFTA3P0C7M3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.42■□□□□ 0.22
SFTA3P0C7M3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SFTA3P0C7M3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SFTA3P0C7M3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
SFTA3P0C7M3 FZD10-202ENST00000539839 3282 ntBASIC16.41■□□□□ 0.22
SFTA3P0C7M3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SFTA3P0C7M3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SFTA3P0C7M3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SFTA3P0C7M3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.41■□□□□ 0.22
SFTA3P0C7M3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.41■□□□□ 0.22
SFTA3P0C7M3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC16.41■□□□□ 0.22
SFTA3P0C7M3 LBH-205ENST00000407930 756 ntTSL 2 BASIC16.41■□□□□ 0.22
SFTA3P0C7M3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.41■□□□□ 0.22
SFTA3P0C7M3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC16.41■□□□□ 0.22
SFTA3P0C7M3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC16.41■□□□□ 0.22
SFTA3P0C7M3 GAK-223ENST00000628912 497 ntTSL 5 BASIC16.41■□□□□ 0.22
SFTA3P0C7M3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SFTA3P0C7M3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SFTA3P0C7M3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SFTA3P0C7M3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SFTA3P0C7M3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms