Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
OPN1SWP03999 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.2■□□□□ 0.66
OPN1SWP03999 TPRG1LP1-201ENST00000598702 760 ntBASIC19.2■□□□□ 0.66
OPN1SWP03999 MIR6084-201ENST00000622012 110 ntBASIC19.2■□□□□ 0.66
OPN1SWP03999 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
OPN1SWP03999 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
OPN1SWP03999 AC011484.1-201ENST00000377652 1995 ntBASIC19.2■□□□□ 0.66
OPN1SWP03999 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
OPN1SWP03999 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
OPN1SWP03999 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
OPN1SWP03999 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.2■□□□□ 0.66
OPN1SWP03999 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
OPN1SWP03999 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
OPN1SWP03999 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
OPN1SWP03999 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
OPN1SWP03999 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
OPN1SWP03999 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
OPN1SWP03999 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
OPN1SWP03999 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.19■□□□□ 0.66
OPN1SWP03999 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.19■□□□□ 0.66
OPN1SWP03999 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.19■□□□□ 0.66
OPN1SWP03999 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.19■□□□□ 0.66
OPN1SWP03999 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.18■□□□□ 0.66
OPN1SWP03999 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
OPN1SWP03999 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
OPN1SWP03999 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
OPN1SWP03999 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.18■□□□□ 0.66
OPN1SWP03999 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.18■□□□□ 0.66
OPN1SWP03999 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
OPN1SWP03999 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
OPN1SWP03999 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
OPN1SWP03999 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.18■□□□□ 0.66
OPN1SWP03999 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
OPN1SWP03999 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
OPN1SWP03999 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.17■□□□□ 0.66
OPN1SWP03999 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.17■□□□□ 0.66
OPN1SWP03999 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.17■□□□□ 0.66
OPN1SWP03999 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
OPN1SWP03999 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.17■□□□□ 0.66
OPN1SWP03999 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
OPN1SWP03999 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
OPN1SWP03999 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
OPN1SWP03999 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
OPN1SWP03999 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
OPN1SWP03999 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
OPN1SWP03999 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
OPN1SWP03999 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.17■□□□□ 0.66
OPN1SWP03999 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
OPN1SWP03999 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.17■□□□□ 0.66
OPN1SWP03999 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
OPN1SWP03999 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
OPN1SWP03999 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
OPN1SWP03999 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
OPN1SWP03999 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
OPN1SWP03999 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
OPN1SWP03999 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
OPN1SWP03999 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
OPN1SWP03999 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
OPN1SWP03999 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
OPN1SWP03999 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
OPN1SWP03999 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
OPN1SWP03999 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.16■□□□□ 0.66
OPN1SWP03999 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
OPN1SWP03999 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.16■□□□□ 0.66
OPN1SWP03999 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
OPN1SWP03999 AL354811.1-201ENST00000610286 706 ntBASIC19.16■□□□□ 0.66
OPN1SWP03999 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.16■□□□□ 0.66
OPN1SWP03999 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
OPN1SWP03999 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
OPN1SWP03999 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
OPN1SWP03999 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
OPN1SWP03999 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
OPN1SWP03999 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
OPN1SWP03999 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.16■□□□□ 0.66
OPN1SWP03999 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
OPN1SWP03999 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
OPN1SWP03999 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
OPN1SWP03999 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
OPN1SWP03999 AL121603.2-201ENST00000557373 2117 ntBASIC19.15■□□□□ 0.66
OPN1SWP03999 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
OPN1SWP03999 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.15■□□□□ 0.66
OPN1SWP03999 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.15■□□□□ 0.66
OPN1SWP03999 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
OPN1SWP03999 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
OPN1SWP03999 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.15■□□□□ 0.66
OPN1SWP03999 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.15■□□□□ 0.66
OPN1SWP03999 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.15■□□□□ 0.66
OPN1SWP03999 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
OPN1SWP03999 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
OPN1SWP03999 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
OPN1SWP03999 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
OPN1SWP03999 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
OPN1SWP03999 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.15■□□□□ 0.66
OPN1SWP03999 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
OPN1SWP03999 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
OPN1SWP03999 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
OPN1SWP03999 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
OPN1SWP03999 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
OPN1SWP03999 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.14■□□□□ 0.65
OPN1SWP03999 SUDS3P1-201ENST00000505831 966 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms