Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
GGPS1O95749 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
GGPS1O95749 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC23.17■■□□□ 1.3
GGPS1O95749 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC23.17■■□□□ 1.3
GGPS1O95749 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
GGPS1O95749 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
GGPS1O95749 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
GGPS1O95749 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
GGPS1O95749 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
GGPS1O95749 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
GGPS1O95749 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC23.16■■□□□ 1.3
GGPS1O95749 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
GGPS1O95749 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC23.16■■□□□ 1.3
GGPS1O95749 AC026366.1-201ENST00000488803 879 ntBASIC23.16■■□□□ 1.3
GGPS1O95749 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC23.16■■□□□ 1.3
GGPS1O95749 AC060766.5-201ENST00000590539 871 ntBASIC23.16■■□□□ 1.3
GGPS1O95749 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC23.16■■□□□ 1.3
GGPS1O95749 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
GGPS1O95749 HLA-B-256ENST00000639848 1089 ntBASIC23.16■■□□□ 1.3
GGPS1O95749 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
GGPS1O95749 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
GGPS1O95749 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
GGPS1O95749 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
GGPS1O95749 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
GGPS1O95749 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
GGPS1O95749 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
GGPS1O95749 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.15■■□□□ 1.3
GGPS1O95749 MYB-221ENST00000527615 2381 ntTSL 5 BASIC23.15■■□□□ 1.3
GGPS1O95749 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
GGPS1O95749 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
GGPS1O95749 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC23.15■■□□□ 1.3
GGPS1O95749 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.15■■□□□ 1.3
GGPS1O95749 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC23.15■■□□□ 1.3
GGPS1O95749 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
GGPS1O95749 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
GGPS1O95749 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
GGPS1O95749 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
GGPS1O95749 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC23.15■■□□□ 1.3
GGPS1O95749 AP003097.1-201ENST00000530657 1135 ntBASIC23.15■■□□□ 1.3
GGPS1O95749 AC105020.6-201ENST00000621523 1217 ntBASIC23.15■■□□□ 1.3
GGPS1O95749 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.15■■□□□ 1.3
GGPS1O95749 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
GGPS1O95749 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.15■■□□□ 1.3
GGPS1O95749 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.14■■□□□ 1.3
GGPS1O95749 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
GGPS1O95749 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.14■■□□□ 1.3
GGPS1O95749 PALM-207ENST00000590161 2137 ntTSL 4 BASIC23.14■■□□□ 1.3
GGPS1O95749 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
GGPS1O95749 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
GGPS1O95749 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
GGPS1O95749 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.14■■□□□ 1.29
GGPS1O95749 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
GGPS1O95749 AC128676.1-201ENST00000454392 318 ntBASIC23.14■■□□□ 1.29
GGPS1O95749 AC098590.1-201ENST00000468126 897 ntBASIC23.14■■□□□ 1.29
GGPS1O95749 IRX5-204ENST00000560154 879 ntTSL 5 BASIC23.14■■□□□ 1.29
GGPS1O95749 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC23.14■■□□□ 1.29
GGPS1O95749 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
GGPS1O95749 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
GGPS1O95749 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
GGPS1O95749 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
GGPS1O95749 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
GGPS1O95749 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.13■■□□□ 1.29
GGPS1O95749 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
GGPS1O95749 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
GGPS1O95749 MFF-205ENST00000354503 1085 ntTSL 2 BASIC23.13■■□□□ 1.29
GGPS1O95749 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
GGPS1O95749 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
GGPS1O95749 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
GGPS1O95749 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
GGPS1O95749 DET1-205ENST00000558413 583 ntTSL 4 BASIC23.13■■□□□ 1.29
GGPS1O95749 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
GGPS1O95749 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
GGPS1O95749 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
GGPS1O95749 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
GGPS1O95749 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
GGPS1O95749 EXOC3-AS1-202ENST00000623673 1663 ntBASIC23.13■■□□□ 1.29
GGPS1O95749 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
GGPS1O95749 NXN-202ENST00000537628 1340 ntTSL 3 BASIC23.12■■□□□ 1.29
GGPS1O95749 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
GGPS1O95749 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
GGPS1O95749 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
GGPS1O95749 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
GGPS1O95749 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC23.12■■□□□ 1.29
GGPS1O95749 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
GGPS1O95749 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC23.12■■□□□ 1.29
GGPS1O95749 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
GGPS1O95749 RPS2P52-201ENST00000469610 820 ntBASIC23.12■■□□□ 1.29
GGPS1O95749 HES2-205ENST00000487437 968 ntTSL 3 BASIC23.12■■□□□ 1.29
GGPS1O95749 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC23.12■■□□□ 1.29
GGPS1O95749 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC23.12■■□□□ 1.29
GGPS1O95749 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC23.12■■□□□ 1.29
GGPS1O95749 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
GGPS1O95749 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
GGPS1O95749 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
GGPS1O95749 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
GGPS1O95749 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
GGPS1O95749 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC23.11■■□□□ 1.29
GGPS1O95749 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC23.11■■□□□ 1.29
GGPS1O95749 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
GGPS1O95749 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms