Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.32■□□□□ 0.52
CDRT1O95170 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.31■□□□□ 0.52
CDRT1O95170 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDRT1O95170 AP004607.7-201ENST00000527152 1677 ntBASIC18.31■□□□□ 0.52
CDRT1O95170 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CDRT1O95170 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.31■□□□□ 0.52
CDRT1O95170 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDRT1O95170 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDRT1O95170 OR2I1P-207ENST00000453522 948 ntBASIC18.31■□□□□ 0.52
CDRT1O95170 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.31■□□□□ 0.52
CDRT1O95170 AC010525.1-201ENST00000585559 441 ntBASIC18.31■□□□□ 0.52
CDRT1O95170 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.31■□□□□ 0.52
CDRT1O95170 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.31■□□□□ 0.52
CDRT1O95170 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDRT1O95170 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
CDRT1O95170 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDRT1O95170 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDRT1O95170 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDRT1O95170 FP700111.2-201ENST00000619190 1892 ntBASIC18.31■□□□□ 0.52
CDRT1O95170 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDRT1O95170 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDRT1O95170 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.3■□□□□ 0.52
CDRT1O95170 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDRT1O95170 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDRT1O95170 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDRT1O95170 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDRT1O95170 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.3■□□□□ 0.52
CDRT1O95170 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.3■□□□□ 0.52
CDRT1O95170 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDRT1O95170 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDRT1O95170 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.3■□□□□ 0.52
CDRT1O95170 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.3■□□□□ 0.52
CDRT1O95170 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.3■□□□□ 0.52
CDRT1O95170 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDRT1O95170 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDRT1O95170 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.3■□□□□ 0.52
CDRT1O95170 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CDRT1O95170 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDRT1O95170 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDRT1O95170 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDRT1O95170 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CDRT1O95170 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.29■□□□□ 0.52
CDRT1O95170 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDRT1O95170 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.29■□□□□ 0.52
CDRT1O95170 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.29■□□□□ 0.52
CDRT1O95170 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.29■□□□□ 0.52
CDRT1O95170 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDRT1O95170 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDRT1O95170 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDRT1O95170 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDRT1O95170 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDRT1O95170 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CDRT1O95170 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDRT1O95170 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.28■□□□□ 0.52
CDRT1O95170 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDRT1O95170 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDRT1O95170 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDRT1O95170 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDRT1O95170 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDRT1O95170 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CDRT1O95170 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDRT1O95170 AC010141.3-201ENST00000456659 717 ntBASIC18.28■□□□□ 0.52
CDRT1O95170 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.28■□□□□ 0.52
CDRT1O95170 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDRT1O95170 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.28■□□□□ 0.52
CDRT1O95170 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.28■□□□□ 0.52
CDRT1O95170 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.28■□□□□ 0.52
CDRT1O95170 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDRT1O95170 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDRT1O95170 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDRT1O95170 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.28■□□□□ 0.52
CDRT1O95170 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CDRT1O95170 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDRT1O95170 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
CDRT1O95170 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDRT1O95170 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CDRT1O95170 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.27■□□□□ 0.52
CDRT1O95170 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDRT1O95170 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDRT1O95170 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDRT1O95170 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDRT1O95170 AL512631.2-201ENST00000604634 923 ntBASIC18.27■□□□□ 0.52
CDRT1O95170 AC092171.4-201ENST00000609130 632 ntBASIC18.27■□□□□ 0.52
CDRT1O95170 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDRT1O95170 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDRT1O95170 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDRT1O95170 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDRT1O95170 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDRT1O95170 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CDRT1O95170 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDRT1O95170 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.26■□□□□ 0.51
CDRT1O95170 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CDRT1O95170 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.26■□□□□ 0.51
CDRT1O95170 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDRT1O95170 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDRT1O95170 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDRT1O95170 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDRT1O95170 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.26■□□□□ 0.51
CDRT1O95170 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CDRT1O95170 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms