Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLN5O75503 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLN5O75503 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.69■□□□□ 0.26
CLN5O75503 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLN5O75503 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLN5O75503 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLN5O75503 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CLN5O75503 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CLN5O75503 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLN5O75503 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLN5O75503 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CLN5O75503 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC16.69■□□□□ 0.26
CLN5O75503 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.69■□□□□ 0.26
CLN5O75503 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CLN5O75503 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLN5O75503 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLN5O75503 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLN5O75503 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLN5O75503 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLN5O75503 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.69■□□□□ 0.26
CLN5O75503 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
CLN5O75503 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLN5O75503 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC16.68■□□□□ 0.26
CLN5O75503 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLN5O75503 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLN5O75503 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLN5O75503 SLC47A1P1-202ENST00000449666 945 ntBASIC16.68■□□□□ 0.26
CLN5O75503 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLN5O75503 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLN5O75503 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLN5O75503 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLN5O75503 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLN5O75503 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLN5O75503 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CLN5O75503 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CLN5O75503 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CLN5O75503 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLN5O75503 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
CLN5O75503 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.67■□□□□ 0.26
CLN5O75503 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLN5O75503 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.67■□□□□ 0.26
CLN5O75503 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.67■□□□□ 0.26
CLN5O75503 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLN5O75503 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLN5O75503 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLN5O75503 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.67■□□□□ 0.26
CLN5O75503 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLN5O75503 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLN5O75503 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLN5O75503 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CLN5O75503 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CLN5O75503 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CLN5O75503 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.67■□□□□ 0.26
CLN5O75503 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CLN5O75503 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLN5O75503 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLN5O75503 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
CLN5O75503 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLN5O75503 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.67■□□□□ 0.26
CLN5O75503 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLN5O75503 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLN5O75503 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLN5O75503 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLN5O75503 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLN5O75503 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC16.67■□□□□ 0.26
CLN5O75503 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLN5O75503 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
CLN5O75503 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLN5O75503 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLN5O75503 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLN5O75503 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLN5O75503 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC16.66■□□□□ 0.26
CLN5O75503 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLN5O75503 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.66■□□□□ 0.26
CLN5O75503 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLN5O75503 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLN5O75503 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLN5O75503 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLN5O75503 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLN5O75503 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLN5O75503 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLN5O75503 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLN5O75503 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLN5O75503 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLN5O75503 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CLN5O75503 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLN5O75503 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CLN5O75503 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.65■□□□□ 0.26
CLN5O75503 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLN5O75503 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.65■□□□□ 0.26
CLN5O75503 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.65■□□□□ 0.26
CLN5O75503 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLN5O75503 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.65■□□□□ 0.26
CLN5O75503 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLN5O75503 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CLN5O75503 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.65■□□□□ 0.26
CLN5O75503 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.65■□□□□ 0.26
CLN5O75503 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLN5O75503 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLN5O75503 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms