Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDCD6O75340 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PDCD6O75340 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDCD6O75340 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.36■□□□□ 0.37
PDCD6O75340 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.36■□□□□ 0.37
PDCD6O75340 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDCD6O75340 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.36■□□□□ 0.37
PDCD6O75340 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDCD6O75340 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PDCD6O75340 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.36■□□□□ 0.37
PDCD6O75340 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.36■□□□□ 0.37
PDCD6O75340 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDCD6O75340 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDCD6O75340 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDCD6O75340 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDCD6O75340 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.35■□□□□ 0.37
PDCD6O75340 AL162377.1-201ENST00000618844 1793 ntBASIC17.35■□□□□ 0.37
PDCD6O75340 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
PDCD6O75340 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDCD6O75340 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.35■□□□□ 0.37
PDCD6O75340 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.35■□□□□ 0.37
PDCD6O75340 AC245052.3-201ENST00000450182 901 ntBASIC17.35■□□□□ 0.37
PDCD6O75340 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.35■□□□□ 0.37
PDCD6O75340 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.35■□□□□ 0.37
PDCD6O75340 AC138907.5-202ENST00000569484 235 ntBASIC17.35■□□□□ 0.37
PDCD6O75340 KRT16P2-201ENST00000414673 1423 ntBASIC17.35■□□□□ 0.37
PDCD6O75340 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDCD6O75340 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDCD6O75340 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.35■□□□□ 0.37
PDCD6O75340 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDCD6O75340 AL512408.1-201ENST00000569378 2000 ntBASIC17.35■□□□□ 0.37
PDCD6O75340 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
PDCD6O75340 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDCD6O75340 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDCD6O75340 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDCD6O75340 AL391422.3-201ENST00000603791 2761 ntBASIC17.34■□□□□ 0.37
PDCD6O75340 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDCD6O75340 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDCD6O75340 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDCD6O75340 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
PDCD6O75340 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.34■□□□□ 0.37
PDCD6O75340 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDCD6O75340 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDCD6O75340 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDCD6O75340 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDCD6O75340 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDCD6O75340 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDCD6O75340 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
PDCD6O75340 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.34■□□□□ 0.37
PDCD6O75340 MIR6084-201ENST00000622012 110 ntBASIC17.34■□□□□ 0.37
PDCD6O75340 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDCD6O75340 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDCD6O75340 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDCD6O75340 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
PDCD6O75340 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDCD6O75340 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PDCD6O75340 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PDCD6O75340 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PDCD6O75340 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PDCD6O75340 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.33■□□□□ 0.37
PDCD6O75340 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PDCD6O75340 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PDCD6O75340 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PDCD6O75340 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.33■□□□□ 0.36
PDCD6O75340 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PDCD6O75340 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDCD6O75340 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.33■□□□□ 0.36
PDCD6O75340 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.33■□□□□ 0.36
PDCD6O75340 AC120498.10-201ENST00000621827 505 ntBASIC17.33■□□□□ 0.36
PDCD6O75340 RARRES2P11-201ENST00000635158 484 ntBASIC17.33■□□□□ 0.36
PDCD6O75340 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.33■□□□□ 0.36
PDCD6O75340 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.33■□□□□ 0.36
PDCD6O75340 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.33■□□□□ 0.36
PDCD6O75340 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.33■□□□□ 0.36
PDCD6O75340 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.32■□□□□ 0.36
PDCD6O75340 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.32■□□□□ 0.36
PDCD6O75340 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
PDCD6O75340 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PDCD6O75340 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
PDCD6O75340 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDCD6O75340 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDCD6O75340 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.32■□□□□ 0.36
PDCD6O75340 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDCD6O75340 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDCD6O75340 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDCD6O75340 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.32■□□□□ 0.36
PDCD6O75340 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.32■□□□□ 0.36
PDCD6O75340 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDCD6O75340 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDCD6O75340 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDCD6O75340 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.32■□□□□ 0.36
PDCD6O75340 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDCD6O75340 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDCD6O75340 AC092720.2-201ENST00000602388 1665 ntBASIC17.32■□□□□ 0.36
PDCD6O75340 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PDCD6O75340 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PDCD6O75340 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDCD6O75340 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.31■□□□□ 0.36
PDCD6O75340 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDCD6O75340 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms