Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
PFDN1O60925 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.45■□□□□ 0.54
PFDN1O60925 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN1O60925 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN1O60925 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PFDN1O60925 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.45■□□□□ 0.54
PFDN1O60925 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
PFDN1O60925 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN1O60925 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PFDN1O60925 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PFDN1O60925 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.44■□□□□ 0.54
PFDN1O60925 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN1O60925 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN1O60925 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN1O60925 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN1O60925 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.44■□□□□ 0.54
PFDN1O60925 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN1O60925 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN1O60925 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.44■□□□□ 0.54
PFDN1O60925 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PFDN1O60925 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN1O60925 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN1O60925 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PFDN1O60925 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN1O60925 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.44■□□□□ 0.54
PFDN1O60925 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN1O60925 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
PFDN1O60925 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN1O60925 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PFDN1O60925 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN1O60925 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
PFDN1O60925 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN1O60925 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.44■□□□□ 0.54
PFDN1O60925 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN1O60925 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.44■□□□□ 0.54
PFDN1O60925 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.44■□□□□ 0.54
PFDN1O60925 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN1O60925 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
PFDN1O60925 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PFDN1O60925 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PFDN1O60925 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PFDN1O60925 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PFDN1O60925 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PFDN1O60925 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PFDN1O60925 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PFDN1O60925 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PFDN1O60925 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PFDN1O60925 AC027702.1-201ENST00000563810 1770 ntBASIC18.43■□□□□ 0.54
PFDN1O60925 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.43■□□□□ 0.54
PFDN1O60925 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
PFDN1O60925 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
PFDN1O60925 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.43■□□□□ 0.54
PFDN1O60925 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
PFDN1O60925 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PFDN1O60925 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC18.43■□□□□ 0.54
PFDN1O60925 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PFDN1O60925 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PFDN1O60925 AC006128.1-201ENST00000624704 1661 ntBASIC18.43■□□□□ 0.54
PFDN1O60925 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PFDN1O60925 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PFDN1O60925 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PFDN1O60925 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.43■□□□□ 0.54
PFDN1O60925 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.43■□□□□ 0.54
PFDN1O60925 AL139384.1-201ENST00000612143 3047 ntBASIC18.43■□□□□ 0.54
PFDN1O60925 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
PFDN1O60925 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PFDN1O60925 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PFDN1O60925 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.43■□□□□ 0.54
PFDN1O60925 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PFDN1O60925 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PFDN1O60925 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PFDN1O60925 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PFDN1O60925 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
PFDN1O60925 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PFDN1O60925 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PFDN1O60925 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PFDN1O60925 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.42■□□□□ 0.54
PFDN1O60925 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PFDN1O60925 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PFDN1O60925 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.42■□□□□ 0.54
PFDN1O60925 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.42■□□□□ 0.54
PFDN1O60925 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.42■□□□□ 0.54
PFDN1O60925 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.42■□□□□ 0.54
PFDN1O60925 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.42■□□□□ 0.54
PFDN1O60925 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PFDN1O60925 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PFDN1O60925 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PFDN1O60925 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.42■□□□□ 0.54
PFDN1O60925 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PFDN1O60925 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
PFDN1O60925 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PFDN1O60925 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PFDN1O60925 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
PFDN1O60925 AC011270.2-201ENST00000624293 2550 ntBASIC18.41■□□□□ 0.54
PFDN1O60925 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PFDN1O60925 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PFDN1O60925 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
PFDN1O60925 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PFDN1O60925 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.41■□□□□ 0.54
PFDN1O60925 AC020907.5-201ENST00000624372 1936 ntBASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms