Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 RER1-204ENST00000378518 522 ntTSL 3 BASIC25.37■■□□□ 1.65
GRIN3BO60391 LIN28AP1-201ENST00000429574 405 ntBASIC25.37■■□□□ 1.65
GRIN3BO60391 SERP1-205ENST00000487153 657 ntTSL 4 BASIC25.37■■□□□ 1.65
GRIN3BO60391 LINC01238-205ENST00000567549 1107 ntBASIC25.37■■□□□ 1.65
GRIN3BO60391 AC006011.2-201ENST00000621313 1158 ntBASIC25.37■■□□□ 1.65
GRIN3BO60391 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC25.37■■□□□ 1.65
GRIN3BO60391 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC25.37■■□□□ 1.65
GRIN3BO60391 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
GRIN3BO60391 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
GRIN3BO60391 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
GRIN3BO60391 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
GRIN3BO60391 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC25.36■■□□□ 1.65
GRIN3BO60391 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
GRIN3BO60391 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
GRIN3BO60391 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
GRIN3BO60391 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC25.36■■□□□ 1.65
GRIN3BO60391 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
GRIN3BO60391 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC25.36■■□□□ 1.65
GRIN3BO60391 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
GRIN3BO60391 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC25.36■■□□□ 1.65
GRIN3BO60391 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC25.36■■□□□ 1.65
GRIN3BO60391 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
GRIN3BO60391 AC142381.3-201ENST00000568208 1670 ntBASIC25.36■■□□□ 1.65
GRIN3BO60391 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC25.35■■□□□ 1.65
GRIN3BO60391 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC25.35■■□□□ 1.65
GRIN3BO60391 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.35■■□□□ 1.65
GRIN3BO60391 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
GRIN3BO60391 GUK1-204ENST00000366721 689 ntTSL 3 BASIC25.35■■□□□ 1.65
GRIN3BO60391 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
GRIN3BO60391 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC25.35■■□□□ 1.65
GRIN3BO60391 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC25.35■■□□□ 1.65
GRIN3BO60391 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC25.35■■□□□ 1.65
GRIN3BO60391 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
GRIN3BO60391 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
GRIN3BO60391 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
GRIN3BO60391 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC25.34■■□□□ 1.65
GRIN3BO60391 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
GRIN3BO60391 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
GRIN3BO60391 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
GRIN3BO60391 AC138932.3-201ENST00000567634 1902 ntBASIC25.34■■□□□ 1.65
GRIN3BO60391 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC25.34■■□□□ 1.65
GRIN3BO60391 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
GRIN3BO60391 ATP5G1P1-201ENST00000448724 379 ntBASIC25.34■■□□□ 1.65
GRIN3BO60391 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC25.34■■□□□ 1.65
GRIN3BO60391 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC25.34■■□□□ 1.65
GRIN3BO60391 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC25.34■■□□□ 1.65
GRIN3BO60391 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
GRIN3BO60391 CLN6-221ENST00000637494 765 ntTSL 5 BASIC25.34■■□□□ 1.65
GRIN3BO60391 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC25.34■■□□□ 1.65
GRIN3BO60391 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC25.34■■□□□ 1.65
GRIN3BO60391 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
GRIN3BO60391 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
GRIN3BO60391 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
GRIN3BO60391 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
GRIN3BO60391 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
GRIN3BO60391 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
GRIN3BO60391 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC25.33■■□□□ 1.65
GRIN3BO60391 FDX2-207ENST00000494368 584 ntTSL 4 BASIC25.33■■□□□ 1.65
GRIN3BO60391 PP7080-204ENST00000510714 601 ntTSL 3 BASIC25.33■■□□□ 1.65
GRIN3BO60391 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
GRIN3BO60391 AC010203.1-204ENST00000548782 407 ntBASIC25.33■■□□□ 1.65
GRIN3BO60391 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.33■■□□□ 1.65
GRIN3BO60391 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.33■■□□□ 1.64
GRIN3BO60391 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
GRIN3BO60391 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
GRIN3BO60391 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC25.32■■□□□ 1.64
GRIN3BO60391 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
GRIN3BO60391 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
GRIN3BO60391 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
GRIN3BO60391 CRYGFP-201ENST00000418459 633 ntBASIC25.32■■□□□ 1.64
GRIN3BO60391 AL390955.1-201ENST00000428694 934 ntBASIC25.32■■□□□ 1.64
GRIN3BO60391 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC25.32■■□□□ 1.64
GRIN3BO60391 ISCU-203ENST00000431221 799 ntTSL 2 BASIC25.32■■□□□ 1.64
GRIN3BO60391 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC25.32■■□□□ 1.64
GRIN3BO60391 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC25.32■■□□□ 1.64
GRIN3BO60391 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
GRIN3BO60391 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
GRIN3BO60391 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC25.32■■□□□ 1.64
GRIN3BO60391 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
GRIN3BO60391 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
GRIN3BO60391 LGALS8-AS1-201ENST00000487567 1457 ntBASIC25.32■■□□□ 1.64
GRIN3BO60391 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
GRIN3BO60391 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
GRIN3BO60391 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC25.31■■□□□ 1.64
GRIN3BO60391 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC25.31■■□□□ 1.64
GRIN3BO60391 AL450487.1-201ENST00000426799 995 ntBASIC25.31■■□□□ 1.64
GRIN3BO60391 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC25.31■■□□□ 1.64
GRIN3BO60391 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC25.31■■□□□ 1.64
GRIN3BO60391 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC25.31■■□□□ 1.64
GRIN3BO60391 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC25.31■■□□□ 1.64
GRIN3BO60391 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
GRIN3BO60391 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
GRIN3BO60391 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC25.31■■□□□ 1.64
GRIN3BO60391 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC25.31■■□□□ 1.64
GRIN3BO60391 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
GRIN3BO60391 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC25.31■■□□□ 1.64
GRIN3BO60391 AC027702.1-201ENST00000563810 1770 ntBASIC25.31■■□□□ 1.64
GRIN3BO60391 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
GRIN3BO60391 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
GRIN3BO60391 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms