Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GDF9O60383 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GDF9O60383 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GDF9O60383 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GDF9O60383 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GDF9O60383 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
GDF9O60383 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
GDF9O60383 AL355355.2-201ENST00000442321 338 ntBASIC20.17■□□□□ 0.82
GDF9O60383 KRT18P57-201ENST00000443599 1254 ntBASIC20.17■□□□□ 0.82
GDF9O60383 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GDF9O60383 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.17■□□□□ 0.82
GDF9O60383 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
GDF9O60383 AC145285.6-201ENST00000604632 637 ntBASIC20.17■□□□□ 0.82
GDF9O60383 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
GDF9O60383 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.17■□□□□ 0.82
GDF9O60383 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
GDF9O60383 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GDF9O60383 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.17■□□□□ 0.82
GDF9O60383 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GDF9O60383 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
GDF9O60383 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GDF9O60383 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GDF9O60383 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
GDF9O60383 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GDF9O60383 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
GDF9O60383 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
GDF9O60383 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GDF9O60383 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.16■□□□□ 0.82
GDF9O60383 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GDF9O60383 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.16■□□□□ 0.82
GDF9O60383 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.16■□□□□ 0.82
GDF9O60383 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GDF9O60383 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.15■□□□□ 0.82
GDF9O60383 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GDF9O60383 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GDF9O60383 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GDF9O60383 C9orf163-202ENST00000624034 2573 ntBASIC20.15■□□□□ 0.82
GDF9O60383 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.15■□□□□ 0.82
GDF9O60383 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.15■□□□□ 0.82
GDF9O60383 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.15■□□□□ 0.82
GDF9O60383 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.15■□□□□ 0.82
GDF9O60383 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.15■□□□□ 0.82
GDF9O60383 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.15■□□□□ 0.82
GDF9O60383 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GDF9O60383 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GDF9O60383 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GDF9O60383 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.15■□□□□ 0.82
GDF9O60383 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.15■□□□□ 0.82
GDF9O60383 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
GDF9O60383 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.15■□□□□ 0.82
GDF9O60383 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GDF9O60383 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
GDF9O60383 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GDF9O60383 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
GDF9O60383 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GDF9O60383 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
GDF9O60383 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GDF9O60383 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
GDF9O60383 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
GDF9O60383 C11orf96-202ENST00000528572 1834 ntBASIC20.14■□□□□ 0.81
GDF9O60383 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GDF9O60383 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.14■□□□□ 0.81
GDF9O60383 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.14■□□□□ 0.81
GDF9O60383 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GDF9O60383 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.14■□□□□ 0.81
GDF9O60383 KRT8P9-201ENST00000558927 1449 ntBASIC20.14■□□□□ 0.81
GDF9O60383 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
GDF9O60383 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
GDF9O60383 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
GDF9O60383 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.14■□□□□ 0.81
GDF9O60383 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GDF9O60383 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.14■□□□□ 0.81
GDF9O60383 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
GDF9O60383 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.13■□□□□ 0.81
GDF9O60383 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
GDF9O60383 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GDF9O60383 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GDF9O60383 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.13■□□□□ 0.81
GDF9O60383 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
GDF9O60383 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
GDF9O60383 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.13■□□□□ 0.81
GDF9O60383 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.13■□□□□ 0.81
GDF9O60383 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
GDF9O60383 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
GDF9O60383 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GDF9O60383 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
GDF9O60383 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GDF9O60383 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.13■□□□□ 0.81
GDF9O60383 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GDF9O60383 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GDF9O60383 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GDF9O60383 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GDF9O60383 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
GDF9O60383 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GDF9O60383 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GDF9O60383 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
GDF9O60383 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
GDF9O60383 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.12■□□□□ 0.81
GDF9O60383 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.12■□□□□ 0.81
GDF9O60383 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms