Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.57■□□□□ 0.56
SSX4O60224 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SSX4O60224 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.57■□□□□ 0.56
SSX4O60224 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.57■□□□□ 0.56
SSX4O60224 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SSX4O60224 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSX4O60224 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSX4O60224 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSX4O60224 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSX4O60224 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SSX4O60224 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SSX4O60224 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.56■□□□□ 0.56
SSX4O60224 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSX4O60224 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.56■□□□□ 0.56
SSX4O60224 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.56■□□□□ 0.56
SSX4O60224 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.56■□□□□ 0.56
SSX4O60224 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.56■□□□□ 0.56
SSX4O60224 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.56■□□□□ 0.56
SSX4O60224 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.56■□□□□ 0.56
SSX4O60224 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSX4O60224 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSX4O60224 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SSX4O60224 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSX4O60224 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.56■□□□□ 0.56
SSX4O60224 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSX4O60224 LINC01960-201ENST00000563759 1884 ntBASIC18.56■□□□□ 0.56
SSX4O60224 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSX4O60224 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SSX4O60224 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSX4O60224 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSX4O60224 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSX4O60224 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSX4O60224 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSX4O60224 AC073314.1-201ENST00000568729 2216 ntBASIC18.55■□□□□ 0.56
SSX4O60224 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSX4O60224 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SSX4O60224 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSX4O60224 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.55■□□□□ 0.56
SSX4O60224 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSX4O60224 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SSX4O60224 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SSX4O60224 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSX4O60224 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSX4O60224 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSX4O60224 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSX4O60224 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSX4O60224 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.55■□□□□ 0.56
SSX4O60224 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.55■□□□□ 0.56
SSX4O60224 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSX4O60224 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSX4O60224 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSX4O60224 GABARAPL3-202ENST00000624044 1851 ntBASIC18.54■□□□□ 0.56
SSX4O60224 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSX4O60224 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSX4O60224 AP005212.1-201ENST00000581547 1997 ntBASIC18.54■□□□□ 0.56
SSX4O60224 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
SSX4O60224 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSX4O60224 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SSX4O60224 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SSX4O60224 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SSX4O60224 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SSX4O60224 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSX4O60224 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.54■□□□□ 0.56
SSX4O60224 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.54■□□□□ 0.56
SSX4O60224 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSX4O60224 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.54■□□□□ 0.56
SSX4O60224 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSX4O60224 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SSX4O60224 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSX4O60224 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSX4O60224 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SSX4O60224 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSX4O60224 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSX4O60224 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSX4O60224 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SSX4O60224 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SSX4O60224 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSX4O60224 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.53■□□□□ 0.56
SSX4O60224 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSX4O60224 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSX4O60224 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SSX4O60224 ID1-201ENST00000376105 1233 ntBASIC18.53■□□□□ 0.56
SSX4O60224 AC016769.1-201ENST00000409132 1010 ntBASIC18.53■□□□□ 0.56
SSX4O60224 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSX4O60224 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSX4O60224 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSX4O60224 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSX4O60224 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSX4O60224 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.53■□□□□ 0.56
SSX4O60224 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SSX4O60224 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SSX4O60224 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSX4O60224 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.53■□□□□ 0.56
SSX4O60224 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SSX4O60224 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSX4O60224 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.52■□□□□ 0.56
SSX4O60224 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSX4O60224 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SSX4O60224 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSX4O60224 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms