Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAF3IP2O43734 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.34■□□□□ 0.53
TRAF3IP2O43734 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAF3IP2O43734 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.34■□□□□ 0.53
TRAF3IP2O43734 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAF3IP2O43734 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAF3IP2O43734 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAF3IP2O43734 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.33■□□□□ 0.53
TRAF3IP2O43734 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRAF3IP2O43734 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAF3IP2O43734 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAF3IP2O43734 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
TRAF3IP2O43734 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRAF3IP2O43734 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.33■□□□□ 0.52
TRAF3IP2O43734 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRAF3IP2O43734 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAF3IP2O43734 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TRAF3IP2O43734 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
TRAF3IP2O43734 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.33■□□□□ 0.52
TRAF3IP2O43734 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRAF3IP2O43734 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAF3IP2O43734 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRAF3IP2O43734 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRAF3IP2O43734 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.33■□□□□ 0.52
TRAF3IP2O43734 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.33■□□□□ 0.52
TRAF3IP2O43734 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.33■□□□□ 0.52
TRAF3IP2O43734 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAF3IP2O43734 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAF3IP2O43734 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.32■□□□□ 0.52
TRAF3IP2O43734 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAF3IP2O43734 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.32■□□□□ 0.52
TRAF3IP2O43734 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.32■□□□□ 0.52
TRAF3IP2O43734 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAF3IP2O43734 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAF3IP2O43734 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.32■□□□□ 0.52
TRAF3IP2O43734 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.32■□□□□ 0.52
TRAF3IP2O43734 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAF3IP2O43734 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAF3IP2O43734 CNN2P6-201ENST00000439038 900 ntBASIC18.32■□□□□ 0.52
TRAF3IP2O43734 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.32■□□□□ 0.52
TRAF3IP2O43734 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAF3IP2O43734 IKBKGP1-201ENST00000612193 1073 ntBASIC18.32■□□□□ 0.52
TRAF3IP2O43734 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.32■□□□□ 0.52
TRAF3IP2O43734 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
TRAF3IP2O43734 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAF3IP2O43734 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
TRAF3IP2O43734 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAF3IP2O43734 AC027702.1-201ENST00000563810 1770 ntBASIC18.32■□□□□ 0.52
TRAF3IP2O43734 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAF3IP2O43734 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAF3IP2O43734 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TRAF3IP2O43734 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAF3IP2O43734 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAF3IP2O43734 AC007225.1-201ENST00000566331 1836 ntBASIC18.31■□□□□ 0.52
TRAF3IP2O43734 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAF3IP2O43734 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAF3IP2O43734 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAF3IP2O43734 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAF3IP2O43734 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.31■□□□□ 0.52
TRAF3IP2O43734 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAF3IP2O43734 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRAF3IP2O43734 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAF3IP2O43734 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TRAF3IP2O43734 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TRAF3IP2O43734 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRAF3IP2O43734 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAF3IP2O43734 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TRAF3IP2O43734 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.3■□□□□ 0.52
TRAF3IP2O43734 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAF3IP2O43734 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAF3IP2O43734 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAF3IP2O43734 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAF3IP2O43734 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.3■□□□□ 0.52
TRAF3IP2O43734 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAF3IP2O43734 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAF3IP2O43734 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAF3IP2O43734 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAF3IP2O43734 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAF3IP2O43734 CDV3P1-201ENST00000471403 739 ntBASIC18.3■□□□□ 0.52
TRAF3IP2O43734 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.3■□□□□ 0.52
TRAF3IP2O43734 AL591742.1-201ENST00000604433 565 ntBASIC18.3■□□□□ 0.52
TRAF3IP2O43734 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAF3IP2O43734 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.3■□□□□ 0.52
TRAF3IP2O43734 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TRAF3IP2O43734 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAF3IP2O43734 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAF3IP2O43734 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAF3IP2O43734 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAF3IP2O43734 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAF3IP2O43734 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAF3IP2O43734 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAF3IP2O43734 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
TRAF3IP2O43734 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TRAF3IP2O43734 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAF3IP2O43734 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.29■□□□□ 0.52
TRAF3IP2O43734 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAF3IP2O43734 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAF3IP2O43734 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.29■□□□□ 0.52
TRAF3IP2O43734 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.29■□□□□ 0.52
TRAF3IP2O43734 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms