Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.47■□□□□ 0.71
CLOCKO15516 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLOCKO15516 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.47■□□□□ 0.71
CLOCKO15516 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLOCKO15516 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLOCKO15516 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLOCKO15516 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
CLOCKO15516 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CLOCKO15516 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.47■□□□□ 0.71
CLOCKO15516 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLOCKO15516 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLOCKO15516 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLOCKO15516 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.47■□□□□ 0.71
CLOCKO15516 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLOCKO15516 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.47■□□□□ 0.71
CLOCKO15516 RARRES2P6-201ENST00000567333 442 ntBASIC19.47■□□□□ 0.71
CLOCKO15516 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CLOCKO15516 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLOCKO15516 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLOCKO15516 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.47■□□□□ 0.71
CLOCKO15516 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLOCKO15516 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLOCKO15516 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLOCKO15516 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLOCKO15516 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.46■□□□□ 0.71
CLOCKO15516 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLOCKO15516 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CLOCKO15516 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
CLOCKO15516 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLOCKO15516 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLOCKO15516 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLOCKO15516 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.46■□□□□ 0.71
CLOCKO15516 AC136469.2-201ENST00000623944 1028 ntBASIC19.46■□□□□ 0.71
CLOCKO15516 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CLOCKO15516 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CLOCKO15516 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLOCKO15516 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLOCKO15516 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CLOCKO15516 RASA4CP-201ENST00000424092 1398 ntBASIC19.45■□□□□ 0.7
CLOCKO15516 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CLOCKO15516 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CLOCKO15516 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.45■□□□□ 0.7
CLOCKO15516 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLOCKO15516 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLOCKO15516 AC099791.1-201ENST00000416440 715 ntBASIC19.45■□□□□ 0.7
CLOCKO15516 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.45■□□□□ 0.7
CLOCKO15516 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLOCKO15516 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.45■□□□□ 0.7
CLOCKO15516 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLOCKO15516 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLOCKO15516 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.45■□□□□ 0.7
CLOCKO15516 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLOCKO15516 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLOCKO15516 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLOCKO15516 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.45■□□□□ 0.7
CLOCKO15516 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLOCKO15516 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLOCKO15516 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLOCKO15516 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLOCKO15516 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.44■□□□□ 0.7
CLOCKO15516 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLOCKO15516 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.44■□□□□ 0.7
CLOCKO15516 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLOCKO15516 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.44■□□□□ 0.7
CLOCKO15516 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.44■□□□□ 0.7
CLOCKO15516 AC010525.1-201ENST00000585559 441 ntBASIC19.44■□□□□ 0.7
CLOCKO15516 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLOCKO15516 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.44■□□□□ 0.7
CLOCKO15516 AL162377.1-201ENST00000618844 1793 ntBASIC19.44■□□□□ 0.7
CLOCKO15516 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLOCKO15516 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.44■□□□□ 0.7
CLOCKO15516 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.44■□□□□ 0.7
CLOCKO15516 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLOCKO15516 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.43■□□□□ 0.7
CLOCKO15516 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.43■□□□□ 0.7
CLOCKO15516 AC112907.3-201ENST00000577781 2400 ntBASIC19.43■□□□□ 0.7
CLOCKO15516 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLOCKO15516 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLOCKO15516 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.43■□□□□ 0.7
CLOCKO15516 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLOCKO15516 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLOCKO15516 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
CLOCKO15516 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.43■□□□□ 0.7
CLOCKO15516 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.43■□□□□ 0.7
CLOCKO15516 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLOCKO15516 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.42■□□□□ 0.7
CLOCKO15516 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLOCKO15516 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CLOCKO15516 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLOCKO15516 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLOCKO15516 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CLOCKO15516 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLOCKO15516 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.42■□□□□ 0.7
CLOCKO15516 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLOCKO15516 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLOCKO15516 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.42■□□□□ 0.7
CLOCKO15516 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLOCKO15516 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLOCKO15516 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
CLOCKO15516 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms