Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.23■□□□□ 0.51
CCL21O00585 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.23■□□□□ 0.51
CCL21O00585 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCL21O00585 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.23■□□□□ 0.51
CCL21O00585 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CCL21O00585 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
CCL21O00585 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL21O00585 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCL21O00585 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCL21O00585 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL21O00585 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.22■□□□□ 0.51
CCL21O00585 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL21O00585 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL21O00585 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL21O00585 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL21O00585 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.22■□□□□ 0.51
CCL21O00585 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.22■□□□□ 0.51
CCL21O00585 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.22■□□□□ 0.51
CCL21O00585 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CCL21O00585 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.22■□□□□ 0.51
CCL21O00585 AC120498.8-201ENST00000614275 531 ntBASIC18.22■□□□□ 0.51
CCL21O00585 AC006557.6-201ENST00000623071 864 ntBASIC18.22■□□□□ 0.51
CCL21O00585 AL049637.2-201ENST00000641778 930 ntBASIC18.22■□□□□ 0.51
CCL21O00585 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCL21O00585 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCL21O00585 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL21O00585 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CCL21O00585 AL135905.2-201ENST00000584934 1404 ntBASIC18.22■□□□□ 0.51
CCL21O00585 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCL21O00585 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCL21O00585 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCL21O00585 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CCL21O00585 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.21■□□□□ 0.51
CCL21O00585 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CCL21O00585 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CCL21O00585 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CCL21O00585 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.21■□□□□ 0.51
CCL21O00585 AC133681.1-201ENST00000465482 601 ntBASIC18.21■□□□□ 0.51
CCL21O00585 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.21■□□□□ 0.51
CCL21O00585 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.21■□□□□ 0.51
CCL21O00585 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CCL21O00585 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.21■□□□□ 0.51
CCL21O00585 AC110285.5-201ENST00000611501 352 ntBASIC18.21■□□□□ 0.51
CCL21O00585 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.21■□□□□ 0.51
CCL21O00585 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.21■□□□□ 0.51
CCL21O00585 AC127496.7-201ENST00000625110 1798 ntBASIC18.21■□□□□ 0.51
CCL21O00585 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCL21O00585 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCL21O00585 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.21■□□□□ 0.51
CCL21O00585 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.21■□□□□ 0.5
CCL21O00585 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.2■□□□□ 0.5
CCL21O00585 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCL21O00585 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCL21O00585 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCL21O00585 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCL21O00585 KRASP1-201ENST00000407852 552 ntBASIC18.2■□□□□ 0.5
CCL21O00585 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.2■□□□□ 0.5
CCL21O00585 AL390719.1-204ENST00000412397 1219 ntBASIC18.2■□□□□ 0.5
CCL21O00585 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCL21O00585 PGM5P4-201ENST00000421970 445 ntBASIC18.2■□□□□ 0.5
CCL21O00585 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCL21O00585 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.2■□□□□ 0.5
CCL21O00585 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.2■□□□□ 0.5
CCL21O00585 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCL21O00585 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.2■□□□□ 0.5
CCL21O00585 MIR4785-201ENST00000585005 73 ntBASIC18.2■□□□□ 0.5
CCL21O00585 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.2■□□□□ 0.5
CCL21O00585 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCL21O00585 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCL21O00585 AC087633.2-202ENST00000565166 1439 ntBASIC18.2■□□□□ 0.5
CCL21O00585 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCL21O00585 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCL21O00585 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCL21O00585 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCL21O00585 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CCL21O00585 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
CCL21O00585 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.19■□□□□ 0.5
CCL21O00585 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
CCL21O00585 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.19■□□□□ 0.5
CCL21O00585 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.19■□□□□ 0.5
CCL21O00585 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCL21O00585 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCL21O00585 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.19■□□□□ 0.5
CCL21O00585 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCL21O00585 AC133561.5-201ENST00000635547 218 ntBASIC18.19■□□□□ 0.5
CCL21O00585 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCL21O00585 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCL21O00585 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCL21O00585 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCL21O00585 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCL21O00585 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CCL21O00585 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCL21O00585 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCL21O00585 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.18■□□□□ 0.5
CCL21O00585 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CCL21O00585 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CCL21O00585 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.18■□□□□ 0.5
CCL21O00585 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCL21O00585 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.18■□□□□ 0.5
CCL21O00585 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms