Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
AP3B1O00203 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
AP3B1O00203 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
AP3B1O00203 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
AP3B1O00203 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
AP3B1O00203 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
AP3B1O00203 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
AP3B1O00203 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
AP3B1O00203 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
AP3B1O00203 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
AP3B1O00203 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP3B1O00203 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
AP3B1O00203 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP3B1O00203 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
AP3B1O00203 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP3B1O00203 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
AP3B1O00203 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.75■□□□□ 0.91
AP3B1O00203 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
AP3B1O00203 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
AP3B1O00203 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.75■□□□□ 0.91
AP3B1O00203 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.75■□□□□ 0.91
AP3B1O00203 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.75■□□□□ 0.91
AP3B1O00203 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP3B1O00203 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.75■□□□□ 0.91
AP3B1O00203 RBM17P2-201ENST00000616397 1405 ntBASIC20.75■□□□□ 0.91
AP3B1O00203 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP3B1O00203 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP3B1O00203 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
AP3B1O00203 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP3B1O00203 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
AP3B1O00203 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.75■□□□□ 0.91
AP3B1O00203 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP3B1O00203 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP3B1O00203 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
AP3B1O00203 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP3B1O00203 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
AP3B1O00203 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
AP3B1O00203 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.74■□□□□ 0.91
AP3B1O00203 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.74■□□□□ 0.91
AP3B1O00203 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.74■□□□□ 0.91
AP3B1O00203 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
AP3B1O00203 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP3B1O00203 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
AP3B1O00203 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
AP3B1O00203 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP3B1O00203 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP3B1O00203 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
AP3B1O00203 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.73■□□□□ 0.91
AP3B1O00203 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
AP3B1O00203 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.73■□□□□ 0.91
AP3B1O00203 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP3B1O00203 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP3B1O00203 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP3B1O00203 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
AP3B1O00203 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.73■□□□□ 0.91
AP3B1O00203 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.73■□□□□ 0.91
AP3B1O00203 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
AP3B1O00203 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.73■□□□□ 0.91
AP3B1O00203 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
AP3B1O00203 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.73■□□□□ 0.91
AP3B1O00203 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.73■□□□□ 0.91
AP3B1O00203 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP3B1O00203 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
AP3B1O00203 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP3B1O00203 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
AP3B1O00203 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP3B1O00203 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.73■□□□□ 0.91
AP3B1O00203 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
AP3B1O00203 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP3B1O00203 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
AP3B1O00203 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP3B1O00203 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP3B1O00203 AC091799.1-201ENST00000422823 811 ntBASIC20.72■□□□□ 0.91
AP3B1O00203 AC007322.3-201ENST00000426526 701 ntBASIC20.72■□□□□ 0.91
AP3B1O00203 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.72■□□□□ 0.91
AP3B1O00203 CDV3P1-201ENST00000471403 739 ntBASIC20.72■□□□□ 0.91
AP3B1O00203 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.72■□□□□ 0.91
AP3B1O00203 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.72■□□□□ 0.91
AP3B1O00203 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
AP3B1O00203 MIR2861-201ENST00000636310 90 ntBASIC20.72■□□□□ 0.91
AP3B1O00203 AC092720.2-201ENST00000602388 1665 ntBASIC20.72■□□□□ 0.91
AP3B1O00203 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
AP3B1O00203 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP3B1O00203 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.72■□□□□ 0.91
AP3B1O00203 AC019069.1-201ENST00000610008 1333 ntBASIC20.72■□□□□ 0.91
AP3B1O00203 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
AP3B1O00203 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
AP3B1O00203 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
AP3B1O00203 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.71■□□□□ 0.91
AP3B1O00203 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP3B1O00203 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
AP3B1O00203 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.71■□□□□ 0.91
AP3B1O00203 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
AP3B1O00203 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP3B1O00203 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.71■□□□□ 0.91
AP3B1O00203 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
AP3B1O00203 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
AP3B1O00203 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.71■□□□□ 0.91
AP3B1O00203 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP3B1O00203 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms