Protein–RNA interactions for Protein: A6NLE4

SMIM23, Small integral membrane protein 23, humanhuman

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM23A6NLE4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
SMIM23A6NLE4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMIM23A6NLE4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMIM23A6NLE4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM23A6NLE4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.01■□□□□ 0.95
SMIM23A6NLE4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM23A6NLE4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SMIM23A6NLE4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.01■□□□□ 0.95
SMIM23A6NLE4 AC092171.4-201ENST00000609130 632 ntBASIC21.01■□□□□ 0.95
SMIM23A6NLE4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM23A6NLE4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM23A6NLE4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
SMIM23A6NLE4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM23A6NLE4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM23A6NLE4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SMIM23A6NLE4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM23A6NLE4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.01■□□□□ 0.95
SMIM23A6NLE4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.01■□□□□ 0.95
SMIM23A6NLE4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM23A6NLE4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SMIM23A6NLE4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMIM23A6NLE4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMIM23A6NLE4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMIM23A6NLE4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21■□□□□ 0.95
SMIM23A6NLE4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMIM23A6NLE4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SMIM23A6NLE4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
SMIM23A6NLE4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMIM23A6NLE4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21■□□□□ 0.95
SMIM23A6NLE4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SMIM23A6NLE4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SMIM23A6NLE4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMIM23A6NLE4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMIM23A6NLE4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SMIM23A6NLE4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM23A6NLE4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM23A6NLE4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.99■□□□□ 0.95
SMIM23A6NLE4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.99■□□□□ 0.95
SMIM23A6NLE4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM23A6NLE4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM23A6NLE4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
SMIM23A6NLE4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM23A6NLE4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM23A6NLE4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.99■□□□□ 0.95
SMIM23A6NLE4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM23A6NLE4 AP005435.1-201ENST00000529293 1178 ntBASIC20.99■□□□□ 0.95
SMIM23A6NLE4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.99■□□□□ 0.95
SMIM23A6NLE4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM23A6NLE4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM23A6NLE4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM23A6NLE4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.98■□□□□ 0.95
SMIM23A6NLE4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMIM23A6NLE4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.98■□□□□ 0.95
SMIM23A6NLE4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMIM23A6NLE4 AL020996.1-203ENST00000536896 2307 ntBASIC20.98■□□□□ 0.95
SMIM23A6NLE4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SMIM23A6NLE4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMIM23A6NLE4 SERBP1P1-201ENST00000396021 1160 ntBASIC20.98■□□□□ 0.95
SMIM23A6NLE4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMIM23A6NLE4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.98■□□□□ 0.95
SMIM23A6NLE4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.98■□□□□ 0.95
SMIM23A6NLE4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SMIM23A6NLE4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMIM23A6NLE4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMIM23A6NLE4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM23A6NLE4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM23A6NLE4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM23A6NLE4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM23A6NLE4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM23A6NLE4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM23A6NLE4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.97■□□□□ 0.95
SMIM23A6NLE4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.97■□□□□ 0.95
SMIM23A6NLE4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM23A6NLE4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM23A6NLE4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.97■□□□□ 0.95
SMIM23A6NLE4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM23A6NLE4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM23A6NLE4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM23A6NLE4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.97■□□□□ 0.95
SMIM23A6NLE4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.97■□□□□ 0.95
SMIM23A6NLE4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM23A6NLE4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMIM23A6NLE4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMIM23A6NLE4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMIM23A6NLE4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.96■□□□□ 0.95
SMIM23A6NLE4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMIM23A6NLE4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SMIM23A6NLE4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.96■□□□□ 0.95
SMIM23A6NLE4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.96■□□□□ 0.95
SMIM23A6NLE4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.96■□□□□ 0.95
SMIM23A6NLE4 MIR3621-201ENST00000580529 85 ntBASIC20.96■□□□□ 0.95
SMIM23A6NLE4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SMIM23A6NLE4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.96■□□□□ 0.95
SMIM23A6NLE4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
SMIM23A6NLE4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
SMIM23A6NLE4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.96■□□□□ 0.95
SMIM23A6NLE4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMIM23A6NLE4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMIM23A6NLE4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
SMIM23A6NLE4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms