Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.86■□□□□ 0.61
TRBV4-1A0A0J9YWV2 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV4-1A0A0J9YWV2 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.86■□□□□ 0.61
TRBV4-1A0A0J9YWV2 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TRBV4-1A0A0J9YWV2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
TRBV4-1A0A0J9YWV2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV4-1A0A0J9YWV2 RASA4CP-201ENST00000424092 1398 ntBASIC18.86■□□□□ 0.61
TRBV4-1A0A0J9YWV2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.86■□□□□ 0.61
TRBV4-1A0A0J9YWV2 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
TRBV4-1A0A0J9YWV2 EDA-201ENST00000338901 1233 ntBASIC18.86■□□□□ 0.61
TRBV4-1A0A0J9YWV2 MIR939-201ENST00000401314 82 ntBASIC18.86■□□□□ 0.61
TRBV4-1A0A0J9YWV2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.86■□□□□ 0.61
TRBV4-1A0A0J9YWV2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.86■□□□□ 0.61
TRBV4-1A0A0J9YWV2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV4-1A0A0J9YWV2 AC012414.1-201ENST00000556676 535 ntBASIC18.86■□□□□ 0.61
TRBV4-1A0A0J9YWV2 AF213884.3-201ENST00000563833 479 ntBASIC18.86■□□□□ 0.61
TRBV4-1A0A0J9YWV2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.86■□□□□ 0.61
TRBV4-1A0A0J9YWV2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV4-1A0A0J9YWV2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV4-1A0A0J9YWV2 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV4-1A0A0J9YWV2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV4-1A0A0J9YWV2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV4-1A0A0J9YWV2 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.85■□□□□ 0.61
TRBV4-1A0A0J9YWV2 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.85■□□□□ 0.61
TRBV4-1A0A0J9YWV2 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV4-1A0A0J9YWV2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV4-1A0A0J9YWV2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.85■□□□□ 0.61
TRBV4-1A0A0J9YWV2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.85■□□□□ 0.61
TRBV4-1A0A0J9YWV2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
TRBV4-1A0A0J9YWV2 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.85■□□□□ 0.61
TRBV4-1A0A0J9YWV2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.85■□□□□ 0.61
TRBV4-1A0A0J9YWV2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.85■□□□□ 0.61
TRBV4-1A0A0J9YWV2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.85■□□□□ 0.61
TRBV4-1A0A0J9YWV2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.85■□□□□ 0.61
TRBV4-1A0A0J9YWV2 TPRG1LP1-201ENST00000598702 760 ntBASIC18.85■□□□□ 0.61
TRBV4-1A0A0J9YWV2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV4-1A0A0J9YWV2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
TRBV4-1A0A0J9YWV2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV4-1A0A0J9YWV2 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV4-1A0A0J9YWV2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TRBV4-1A0A0J9YWV2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV4-1A0A0J9YWV2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV4-1A0A0J9YWV2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TRBV4-1A0A0J9YWV2 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.84■□□□□ 0.61
TRBV4-1A0A0J9YWV2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.84■□□□□ 0.61
TRBV4-1A0A0J9YWV2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV4-1A0A0J9YWV2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.84■□□□□ 0.61
TRBV4-1A0A0J9YWV2 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV4-1A0A0J9YWV2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV4-1A0A0J9YWV2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV4-1A0A0J9YWV2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV4-1A0A0J9YWV2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV4-1A0A0J9YWV2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.84■□□□□ 0.61
TRBV4-1A0A0J9YWV2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV4-1A0A0J9YWV2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.84■□□□□ 0.61
TRBV4-1A0A0J9YWV2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV4-1A0A0J9YWV2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.84■□□□□ 0.61
TRBV4-1A0A0J9YWV2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV4-1A0A0J9YWV2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.84■□□□□ 0.61
TRBV4-1A0A0J9YWV2 AL355001.2-201ENST00000620617 1191 ntBASIC18.84■□□□□ 0.61
TRBV4-1A0A0J9YWV2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV4-1A0A0J9YWV2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.84■□□□□ 0.61
TRBV4-1A0A0J9YWV2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV4-1A0A0J9YWV2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV4-1A0A0J9YWV2 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV4-1A0A0J9YWV2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV4-1A0A0J9YWV2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.83■□□□□ 0.61
TRBV4-1A0A0J9YWV2 AC008406.3-201ENST00000620001 1374 ntBASIC18.83■□□□□ 0.61
TRBV4-1A0A0J9YWV2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.83■□□□□ 0.61
TRBV4-1A0A0J9YWV2 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRBV4-1A0A0J9YWV2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRBV4-1A0A0J9YWV2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV4-1A0A0J9YWV2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.83■□□□□ 0.6
TRBV4-1A0A0J9YWV2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.83■□□□□ 0.6
TRBV4-1A0A0J9YWV2 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV4-1A0A0J9YWV2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.83■□□□□ 0.6
TRBV4-1A0A0J9YWV2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV4-1A0A0J9YWV2 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
TRBV4-1A0A0J9YWV2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV4-1A0A0J9YWV2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.83■□□□□ 0.6
TRBV4-1A0A0J9YWV2 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV4-1A0A0J9YWV2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV4-1A0A0J9YWV2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV4-1A0A0J9YWV2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV4-1A0A0J9YWV2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.82■□□□□ 0.6
TRBV4-1A0A0J9YWV2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.82■□□□□ 0.6
TRBV4-1A0A0J9YWV2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.82■□□□□ 0.6
TRBV4-1A0A0J9YWV2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV4-1A0A0J9YWV2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV4-1A0A0J9YWV2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TRBV4-1A0A0J9YWV2 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.82■□□□□ 0.6
TRBV4-1A0A0J9YWV2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV4-1A0A0J9YWV2 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.82■□□□□ 0.6
TRBV4-1A0A0J9YWV2 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
TRBV4-1A0A0J9YWV2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.82■□□□□ 0.6
TRBV4-1A0A0J9YWV2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.82■□□□□ 0.6
TRBV4-1A0A0J9YWV2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.82■□□□□ 0.6
TRBV4-1A0A0J9YWV2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.82■□□□□ 0.6
TRBV4-1A0A0J9YWV2 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV4-1A0A0J9YWV2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms