Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-2A0A0B4J235 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-2A0A0B4J235 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-2A0A0B4J235 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-2A0A0B4J235 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-2A0A0B4J235 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC13.59□□□□□ -0.23
TRAV13-2A0A0B4J235 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-2A0A0B4J235 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-2A0A0B4J235 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV13-2A0A0B4J235 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV13-2A0A0B4J235 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-2A0A0B4J235 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-2A0A0B4J235 AC116562.4-201ENST00000641316 2276 ntBASIC13.59□□□□□ -0.23
TRAV13-2A0A0B4J235 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
TRAV13-2A0A0B4J235 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-2A0A0B4J235 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC13.59□□□□□ -0.23
TRAV13-2A0A0B4J235 NKILA-201ENST00000613231 537 ntTSL 4 BASIC13.59□□□□□ -0.23
TRAV13-2A0A0B4J235 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV13-2A0A0B4J235 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
TRAV13-2A0A0B4J235 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TRAV13-2A0A0B4J235 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-2A0A0B4J235 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-2A0A0B4J235 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-2A0A0B4J235 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC13.59□□□□□ -0.23
TRAV13-2A0A0B4J235 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-2A0A0B4J235 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-2A0A0B4J235 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
TRAV13-2A0A0B4J235 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-2A0A0B4J235 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
TRAV13-2A0A0B4J235 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC13.58□□□□□ -0.23
TRAV13-2A0A0B4J235 AC099778.1-201ENST00000568593 1911 ntBASIC13.58□□□□□ -0.23
TRAV13-2A0A0B4J235 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRAV13-2A0A0B4J235 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 AL512408.1-201ENST00000569378 2000 ntBASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV13-2A0A0B4J235 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRAV13-2A0A0B4J235 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRAV13-2A0A0B4J235 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRAV13-2A0A0B4J235 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC13.57□□□□□ -0.24
TRAV13-2A0A0B4J235 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-2A0A0B4J235 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-2A0A0B4J235 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-2A0A0B4J235 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-2A0A0B4J235 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-2A0A0B4J235 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-2A0A0B4J235 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC13.57□□□□□ -0.24
TRAV13-2A0A0B4J235 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC13.57□□□□□ -0.24
TRAV13-2A0A0B4J235 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-2A0A0B4J235 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV13-2A0A0B4J235 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-2A0A0B4J235 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-2A0A0B4J235 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-2A0A0B4J235 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
TRAV13-2A0A0B4J235 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-2A0A0B4J235 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-2A0A0B4J235 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-2A0A0B4J235 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC13.57□□□□□ -0.24
TRAV13-2A0A0B4J235 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-2A0A0B4J235 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-2A0A0B4J235 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-2A0A0B4J235 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV13-2A0A0B4J235 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC13.57□□□□□ -0.24
TRAV13-2A0A0B4J235 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
TRAV13-2A0A0B4J235 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-2A0A0B4J235 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-2A0A0B4J235 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-2A0A0B4J235 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-2A0A0B4J235 TNXA-203ENST00000507684 2038 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms