Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TRAV8-1A0A0A6YYK1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-1A0A0A6YYK1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-1A0A0A6YYK1 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRAV8-1A0A0A6YYK1 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-1A0A0A6YYK1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV8-1A0A0A6YYK1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-1A0A0A6YYK1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-1A0A0A6YYK1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-1A0A0A6YYK1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-1A0A0A6YYK1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRAV8-1A0A0A6YYK1 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-1A0A0A6YYK1 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-1A0A0A6YYK1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-1A0A0A6YYK1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TRAV8-1A0A0A6YYK1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV8-1A0A0A6YYK1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-1A0A0A6YYK1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-1A0A0A6YYK1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-1A0A0A6YYK1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TRAV8-1A0A0A6YYK1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-1A0A0A6YYK1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
TRAV8-1A0A0A6YYK1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TRAV8-1A0A0A6YYK1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV8-1A0A0A6YYK1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-1A0A0A6YYK1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-1A0A0A6YYK1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAV8-1A0A0A6YYK1 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-1A0A0A6YYK1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-1A0A0A6YYK1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAV8-1A0A0A6YYK1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
TRAV8-1A0A0A6YYK1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TRAV8-1A0A0A6YYK1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-1A0A0A6YYK1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-1A0A0A6YYK1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRAV8-1A0A0A6YYK1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-1A0A0A6YYK1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-1A0A0A6YYK1 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-1A0A0A6YYK1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-1A0A0A6YYK1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TRAV8-1A0A0A6YYK1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
TRAV8-1A0A0A6YYK1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-1A0A0A6YYK1 BX005040.4-201ENST00000637145 1518 ntBASIC15.59■□□□□ 0.09
TRAV8-1A0A0A6YYK1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRAV8-1A0A0A6YYK1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-1A0A0A6YYK1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-1A0A0A6YYK1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV8-1A0A0A6YYK1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV8-1A0A0A6YYK1 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV8-1A0A0A6YYK1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-1A0A0A6YYK1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-1A0A0A6YYK1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC15.59■□□□□ 0.09
TRAV8-1A0A0A6YYK1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV8-1A0A0A6YYK1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC15.59■□□□□ 0.09
TRAV8-1A0A0A6YYK1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
TRAV8-1A0A0A6YYK1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-1A0A0A6YYK1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV8-1A0A0A6YYK1 SF1-220ENST00000626028 704 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV8-1A0A0A6YYK1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TRAV8-1A0A0A6YYK1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-1A0A0A6YYK1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-1A0A0A6YYK1 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-1A0A0A6YYK1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV8-1A0A0A6YYK1 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-1A0A0A6YYK1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV8-1A0A0A6YYK1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
TRAV8-1A0A0A6YYK1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV8-1A0A0A6YYK1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV8-1A0A0A6YYK1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV8-1A0A0A6YYK1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV8-1A0A0A6YYK1 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV8-1A0A0A6YYK1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV8-1A0A0A6YYK1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV8-1A0A0A6YYK1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TRAV8-1A0A0A6YYK1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV8-1A0A0A6YYK1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV8-1A0A0A6YYK1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC15.58■□□□□ 0.08
TRAV8-1A0A0A6YYK1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV8-1A0A0A6YYK1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV8-1A0A0A6YYK1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV8-1A0A0A6YYK1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV8-1A0A0A6YYK1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV8-1A0A0A6YYK1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TRAV8-1A0A0A6YYK1 AC055733.4-201ENST00000638462 1354 ntBASIC15.58■□□□□ 0.08
TRAV8-1A0A0A6YYK1 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV8-1A0A0A6YYK1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
TRAV8-1A0A0A6YYK1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV8-1A0A0A6YYK1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV8-1A0A0A6YYK1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TRAV8-1A0A0A6YYK1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-1A0A0A6YYK1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRAV8-1A0A0A6YYK1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-1A0A0A6YYK1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TRAV8-1A0A0A6YYK1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-1A0A0A6YYK1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.57■□□□□ 0.08
TRAV8-1A0A0A6YYK1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-1A0A0A6YYK1 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-1A0A0A6YYK1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-1A0A0A6YYK1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV8-1A0A0A6YYK1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms