Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFSF12-TNFSF13A0A0A6YY99 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFSF12-TNFSF13A0A0A6YY99 GPX1P1-201ENST00000388829 606 ntBASIC18.72■□□□□ 0.59
TNFSF12-TNFSF13A0A0A6YY99 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TNFSF12-TNFSF13A0A0A6YY99 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.72■□□□□ 0.59
TNFSF12-TNFSF13A0A0A6YY99 CDV3P1-201ENST00000471403 739 ntBASIC18.72■□□□□ 0.59
TNFSF12-TNFSF13A0A0A6YY99 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.72■□□□□ 0.59
TNFSF12-TNFSF13A0A0A6YY99 AL591742.1-201ENST00000604433 565 ntBASIC18.72■□□□□ 0.59
TNFSF12-TNFSF13A0A0A6YY99 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TNFSF12-TNFSF13A0A0A6YY99 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFSF12-TNFSF13A0A0A6YY99 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFSF12-TNFSF13A0A0A6YY99 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.72■□□□□ 0.59
TNFSF12-TNFSF13A0A0A6YY99 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFSF12-TNFSF13A0A0A6YY99 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TNFSF12-TNFSF13A0A0A6YY99 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
TNFSF12-TNFSF13A0A0A6YY99 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TNFSF12-TNFSF13A0A0A6YY99 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.71■□□□□ 0.59
TNFSF12-TNFSF13A0A0A6YY99 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNFSF12-TNFSF13A0A0A6YY99 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.71■□□□□ 0.59
TNFSF12-TNFSF13A0A0A6YY99 AC007322.3-201ENST00000426526 701 ntBASIC18.71■□□□□ 0.59
TNFSF12-TNFSF13A0A0A6YY99 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TNFSF12-TNFSF13A0A0A6YY99 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TNFSF12-TNFSF13A0A0A6YY99 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNFSF12-TNFSF13A0A0A6YY99 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.71■□□□□ 0.59
TNFSF12-TNFSF13A0A0A6YY99 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TNFSF12-TNFSF13A0A0A6YY99 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNFSF12-TNFSF13A0A0A6YY99 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNFSF12-TNFSF13A0A0A6YY99 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNFSF12-TNFSF13A0A0A6YY99 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNFSF12-TNFSF13A0A0A6YY99 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.71■□□□□ 0.59
TNFSF12-TNFSF13A0A0A6YY99 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.71■□□□□ 0.59
TNFSF12-TNFSF13A0A0A6YY99 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.7■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 AC006128.1-201ENST00000624704 1661 ntBASIC18.7■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.7■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 AL162412.1-201ENST00000567129 965 ntBASIC18.7■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 AL121832.2-201ENST00000610979 668 ntBASIC18.7■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.7■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.7■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.68■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 AL355802.2-201ENST00000402069 882 ntBASIC18.68■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 AC083906.2-201ENST00000511578 360 ntBASIC18.68■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.68■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.68■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.68■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 AC068338.2-201ENST00000563278 1430 ntBASIC18.67■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.67■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.67■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.67■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.67■□□□□ 0.58
TNFSF12-TNFSF13A0A0A6YY99 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms