Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV6-7A0A0A0MS04 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.22■□□□□ 0.35
TRBV6-7A0A0A0MS04 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV6-7A0A0A0MS04 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.22■□□□□ 0.35
TRBV6-7A0A0A0MS04 EDA-201ENST00000338901 1233 ntBASIC17.22■□□□□ 0.35
TRBV6-7A0A0A0MS04 AC096631.2-201ENST00000436136 790 ntBASIC17.22■□□□□ 0.35
TRBV6-7A0A0A0MS04 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.22■□□□□ 0.35
TRBV6-7A0A0A0MS04 PBX2P1-201ENST00000493219 1291 ntBASIC17.22■□□□□ 0.35
TRBV6-7A0A0A0MS04 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.22■□□□□ 0.35
TRBV6-7A0A0A0MS04 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.22■□□□□ 0.35
TRBV6-7A0A0A0MS04 AC106739.1-201ENST00000617035 715 ntBASIC17.22■□□□□ 0.35
TRBV6-7A0A0A0MS04 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.22■□□□□ 0.35
TRBV6-7A0A0A0MS04 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TRBV6-7A0A0A0MS04 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.21■□□□□ 0.35
TRBV6-7A0A0A0MS04 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV6-7A0A0A0MS04 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRBV6-7A0A0A0MS04 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV6-7A0A0A0MS04 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.21■□□□□ 0.35
TRBV6-7A0A0A0MS04 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.21■□□□□ 0.35
TRBV6-7A0A0A0MS04 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV6-7A0A0A0MS04 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV6-7A0A0A0MS04 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV6-7A0A0A0MS04 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV6-7A0A0A0MS04 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV6-7A0A0A0MS04 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV6-7A0A0A0MS04 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TRBV6-7A0A0A0MS04 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.21■□□□□ 0.35
TRBV6-7A0A0A0MS04 AP001330.3-201ENST00000520123 633 ntBASIC17.21■□□□□ 0.35
TRBV6-7A0A0A0MS04 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.21■□□□□ 0.35
TRBV6-7A0A0A0MS04 EEF1DP3-203ENST00000566025 782 ntBASIC17.21■□□□□ 0.35
TRBV6-7A0A0A0MS04 AC053503.5-201ENST00000601508 636 ntBASIC17.21■□□□□ 0.35
TRBV6-7A0A0A0MS04 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV6-7A0A0A0MS04 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TRBV6-7A0A0A0MS04 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.21■□□□□ 0.35
TRBV6-7A0A0A0MS04 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TRBV6-7A0A0A0MS04 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV6-7A0A0A0MS04 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TRBV6-7A0A0A0MS04 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV6-7A0A0A0MS04 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV6-7A0A0A0MS04 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.2■□□□□ 0.34
TRBV6-7A0A0A0MS04 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TRBV6-7A0A0A0MS04 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.2■□□□□ 0.34
TRBV6-7A0A0A0MS04 RASA4CP-201ENST00000424092 1398 ntBASIC17.2■□□□□ 0.34
TRBV6-7A0A0A0MS04 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV6-7A0A0A0MS04 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV6-7A0A0A0MS04 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
TRBV6-7A0A0A0MS04 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.2■□□□□ 0.34
TRBV6-7A0A0A0MS04 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.2■□□□□ 0.34
TRBV6-7A0A0A0MS04 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.2■□□□□ 0.34
TRBV6-7A0A0A0MS04 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV6-7A0A0A0MS04 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TRBV6-7A0A0A0MS04 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV6-7A0A0A0MS04 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
TRBV6-7A0A0A0MS04 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV6-7A0A0A0MS04 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.19■□□□□ 0.34
TRBV6-7A0A0A0MS04 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV6-7A0A0A0MS04 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV6-7A0A0A0MS04 AC008406.3-201ENST00000620001 1374 ntBASIC17.19■□□□□ 0.34
TRBV6-7A0A0A0MS04 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV6-7A0A0A0MS04 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.19■□□□□ 0.34
TRBV6-7A0A0A0MS04 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.19■□□□□ 0.34
TRBV6-7A0A0A0MS04 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV6-7A0A0A0MS04 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV6-7A0A0A0MS04 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV6-7A0A0A0MS04 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRBV6-7A0A0A0MS04 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV6-7A0A0A0MS04 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV6-7A0A0A0MS04 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.18■□□□□ 0.34
TRBV6-7A0A0A0MS04 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.18■□□□□ 0.34
TRBV6-7A0A0A0MS04 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
TRBV6-7A0A0A0MS04 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.18■□□□□ 0.34
TRBV6-7A0A0A0MS04 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV6-7A0A0A0MS04 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV6-7A0A0A0MS04 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV6-7A0A0A0MS04 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.18■□□□□ 0.34
TRBV6-7A0A0A0MS04 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV6-7A0A0A0MS04 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV6-7A0A0A0MS04 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.18■□□□□ 0.34
TRBV6-7A0A0A0MS04 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.18■□□□□ 0.34
TRBV6-7A0A0A0MS04 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.18■□□□□ 0.34
TRBV6-7A0A0A0MS04 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.18■□□□□ 0.34
TRBV6-7A0A0A0MS04 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV6-7A0A0A0MS04 AL355001.2-201ENST00000620617 1191 ntBASIC17.18■□□□□ 0.34
TRBV6-7A0A0A0MS04 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV6-7A0A0A0MS04 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.18■□□□□ 0.34
TRBV6-7A0A0A0MS04 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.18■□□□□ 0.34
TRBV6-7A0A0A0MS04 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.18■□□□□ 0.34
TRBV6-7A0A0A0MS04 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV6-7A0A0A0MS04 AP004607.4-201ENST00000530158 1459 ntBASIC17.18■□□□□ 0.34
TRBV6-7A0A0A0MS04 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV6-7A0A0A0MS04 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.17■□□□□ 0.34
TRBV6-7A0A0A0MS04 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV6-7A0A0A0MS04 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV6-7A0A0A0MS04 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.17■□□□□ 0.34
TRBV6-7A0A0A0MS04 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.17■□□□□ 0.34
TRBV6-7A0A0A0MS04 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV6-7A0A0A0MS04 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV6-7A0A0A0MS04 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV6-7A0A0A0MS04 MIR939-201ENST00000401314 82 ntBASIC17.17■□□□□ 0.34
TRBV6-7A0A0A0MS04 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms