Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 TRIM64FP-201ENST00000427305 1371 ntBASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 CRISP2-202ENST00000616725 1376 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 TGFB2-OT1-201ENST00000625474 1371 ntBASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 IGBP1-202ENST00000356413 1666 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 PNPT1P1-201ENST00000450418 2315 ntBASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 CNR1-205ENST00000468898 1320 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 CDV3-202ENST00000420115 3621 ntTSL 2 BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 CDH11-202ENST00000394156 6874 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 PTPRB-201ENST00000261266 6110 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 KCNQ3-204ENST00000521134 2577 ntAPPRIS ALT2 TSL 2 BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 MRPL48-202ENST00000314282 1922 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 SNHG16-207ENST00000590435 1947 ntTSL 5 BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 CNOT9-202ENST00000295701 1126 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 MIR219A1-201ENST00000362166 110 ntBASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 WFDC3-203ENST00000372630 597 ntTSL 3 BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 HIST1H2BI-201ENST00000377733 381 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 TPM3P2-201ENST00000397772 723 ntBASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 RPSAP17-201ENST00000437336 883 ntBASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 AL050402.1-201ENST00000440477 770 ntTSL 3 BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 TRAF3IP2-AS1-206ENST00000449449 784 ntTSL 3 BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 LHFPL3-AS2-201ENST00000453666 923 ntTSL 3 BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 AC096536.1-203ENST00000455380 515 ntTSL 5 BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 RN7SL698P-201ENST00000480095 302 ntBASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 LINC00498-201ENST00000504369 455 ntTSL 3 BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 SNORA68.4-201ENST00000516649 129 ntBASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 HPYR1-201ENST00000520457 982 ntBASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 AC025524.2-201ENST00000520862 536 ntTSL 4 BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 AP002812.5-201ENST00000530972 712 ntTSL 2 BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 ST3GAL3-234ENST00000531993 786 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 NACA-204ENST00000546392 802 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 AL139300.2-201ENST00000556332 553 ntTSL 4 BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 AC006146.1-201ENST00000557304 693 ntTSL 5 BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 AC102797.1-201ENST00000565127 545 ntTSL 4 BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 AC007608.3-202ENST00000570241 1109 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 RN7SL140P-201ENST00000581321 294 ntBASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 LINC01764-202ENST00000589310 441 ntTSL 3 BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 AURKC-206ENST00000598785 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 AC011465.1-201ENST00000599092 328 ntTSL 3 BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 ADAM6-202ENST00000616762 999 ntBASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 PGM5P3-AS1-206ENST00000621255 877 ntTSL 5 BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 TTI2-201ENST00000360742 2242 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 SERPINC1-201ENST00000367698 1594 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 PAX6-246ENST00000638963 1580 ntTSL 5 BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 OR11A1-202ENST00000377148 2482 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 SYT1-202ENST00000393240 3095 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 TTC31-202ENST00000410003 3358 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 LINC01140-206ENST00000484933 3368 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 TRIM32-201ENST00000373983 3688 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 BVES-203ENST00000446408 1500 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 AC009303.4-201ENST00000623784 1500 ntBASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 CAB39L-205ENST00000409308 2416 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 KDM4D-201ENST00000335080 2978 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 MRPL19-202ENST00000393909 3479 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 TPTE-201ENST00000427445 2036 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 TMEM254-AS1-201ENST00000412298 3121 ntTSL 2 BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 AC005524.1-201ENST00000636857 1674 ntBASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 RTL1-201ENST00000534062 4193 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 NRXN3-202ENST00000335750 2764 ntTSL 5 BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 SYNJ2-204ENST00000367122 3029 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 GTF2B-201ENST00000370500 1351 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 SLAMF7-204ENST00000441662 2497 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 AC020604.1-201ENST00000622979 1909 ntBASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 STRADA-227ENST00000638309 1383 ntTSL 5 BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 OR2A20P-204ENST00000641121 2173 ntBASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 C14orf159-228ENST00000523771 2976 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 CBFA2T2-204ENST00000359606 7274 ntTSL 2 BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 FGFR2-209ENST00000369056 2650 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 AC079062.1-202ENST00000581011 2636 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 LINC01910-201ENST00000582251 2637 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 LINC00461-201ENST00000500197 3381 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 ATP5I-201ENST00000304312 365 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 ATOX1-201ENST00000313115 488 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 KRTAP22-1-201ENST00000334680 296 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 UBE2D3-202ENST00000338145 896 ntAPPRIS ALT1 TSL 5 BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 RAET1M-201ENST00000405282 596 ntBASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 STSP1-201ENST00000412493 1151 ntBASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 TPM3P1-201ENST00000413233 747 ntBASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 LINC01890-201ENST00000415448 1017 ntTSL 2 BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 MED15P4-201ENST00000417579 393 ntBASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 LINC00114-202ENST00000429621 827 ntTSL 5 BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 AL109613.1-201ENST00000431770 722 ntTSL 2 BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 AL359094.1-210ENST00000432554 730 ntTSL 3 BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 GSG1-204ENST00000432710 1231 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 AL031729.1-201ENST00000433132 192 ntBASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 CASP12-205ENST00000441710 1168 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 PRDX2P1-201ENST00000450181 589 ntBASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 RN7SL151P-201ENST00000460537 283 ntBASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 RPSAP36-201ENST00000465940 869 ntBASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 LINC00881-202ENST00000471719 791 ntTSL 2 BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 RN7SL737P-201ENST00000490246 282 ntBASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 LINC02115-201ENST00000503367 432 ntTSL 5 BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 PGAM1P1-201ENST00000504014 556 ntBASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 TPT1-AS1-218ENST00000523445 856 ntTSL 5 BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 LINC02327-206ENST00000551588 885 ntTSL 5 BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 DUOXA1-215ENST00000560572 1044 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 RN7SL711P-201ENST00000579731 299 ntBASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 RN7SL378P-201ENST00000582657 298 ntBASIC8.62□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 271.9 ms