RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 DCAF8L2P0C7V8 631 aa16.77■□□□□ 0.27
CDH11-202ENST00000394156 SHROOM4Q9ULL8 1493 aa15.87■□□□□ 0.13
CDH11-202ENST00000394156 NISCHQ9Y2I1 1504 aa15.85■□□□□ 0.13
CDH11-202ENST00000394156 SUPT5HO00267 1087 aaKnown RBP15.79■□□□□ 0.12
CDH11-202ENST00000394156 EHMT2Q96KQ7 1210 aa15.77■□□□□ 0.11
CDH11-202ENST00000394156 TTBK1Q5TCY1 1321 aaPredicted RBP15.1■□□□□ 0.01
CDH11-202ENST00000394156 FAM9AQ8IZU1 332 aaPredicted RBP15.01□□□□□ -0.01
CDH11-202ENST00000394156 RANGAP1P46060 587 aaPredicted RBP14.91□□□□□ -0.02
CDH11-202ENST00000394156 PPARGC1BQ86YN6 1023 aaKnown RBP14.6□□□□□ -0.07
CDH11-202ENST00000394156 PCGF6Q9BYE7 350 aa14.57□□□□□ -0.08
CDH11-202ENST00000394156 ATP1B4Q9UN42 357 aaPredicted RBP14.49□□□□□ -0.09
CDH11-202ENST00000394156 TRIM41Q8WV44 630 aa14.34□□□□□ -0.11
CDH11-202ENST00000394156 APLP2Q06481 763 aa14.34□□□□□ -0.11
CDH11-202ENST00000394156 UBTFP17480 764 aaKnown RBP14.22□□□□□ -0.13
CDH11-202ENST00000394156 LOC105371045A0A1W2PR82 267 aa14.2□□□□□ -0.14
CDH11-202ENST00000394156 CCER1Q8TC90 406 aaPredicted RBP14.1□□□□□ -0.15
CDH11-202ENST00000394156 PABPN1Q86U42 306 aaKnown RBP eCLIP14.09□□□□□ -0.15
CDH11-202ENST00000394156 ABCC9O60706 1549 aa14.06□□□□□ -0.16
CDH11-202ENST00000394156 ITGAEP38570 1179 aa14.04□□□□□ -0.16
CDH11-202ENST00000394156 YTHDC1Q96MU7 727 aaKnown RBP14.04□□□□□ -0.16
CDH11-202ENST00000394156 CNGB1Q14028 1251 aaPredicted RBP13.95□□□□□ -0.18
CDH11-202ENST00000394156 CHIC1Q5VXU3 224 aa13.92□□□□□ -0.18
CDH11-202ENST00000394156 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.83□□□□□ -0.19
CDH11-202ENST00000394156 HNRNPUL2Q1KMD3 747 aaKnown RBP13.83□□□□□ -0.19
CDH11-202ENST00000394156 POLR3GLQ9BT43 218 aa13.78□□□□□ -0.2
CDH11-202ENST00000394156 MYT1LQ9UL68 1186 aa13.76□□□□□ -0.21
CDH11-202ENST00000394156 ARID3CA6NKF2 412 aa13.64□□□□□ -0.23
CDH11-202ENST00000394156 TRIM26Q12899 539 aaPredicted RBP13.61□□□□□ -0.23
CDH11-202ENST00000394156 SCRIBQ14160 1630 aa13.6□□□□□ -0.23
CDH11-202ENST00000394156 P3H3Q8IVL6 736 aa13.53□□□□□ -0.24
CDH11-202ENST00000394156 FBLN2P98095 1184 aa13.53□□□□□ -0.24
CDH11-202ENST00000394156 PELP1Q8IZL8 1130 aaKnown RBP13.52□□□□□ -0.25
CDH11-202ENST00000394156 FAM50AQ14320 339 aaKnown RBP13.51□□□□□ -0.25
CDH11-202ENST00000394156 HRCP23327 699 aa13.49□□□□□ -0.25
CDH11-202ENST00000394156 ZEB1P37275 1124 aaPredicted RBP13.48□□□□□ -0.25
CDH11-202ENST00000394156 CENPBP07199 599 aaPredicted RBP13.48□□□□□ -0.25
CDH11-202ENST00000394156 NEUROD1Q13562 356 aa13.46□□□□□ -0.26
CDH11-202ENST00000394156 SLC4A1APQ9BWU0 796 aaKnown RBP13.45□□□□□ -0.26
CDH11-202ENST00000394156 ERICH6Q7L0X2 663 aa13.39□□□□□ -0.27
CDH11-202ENST00000394156 TRIM52Q96A61 297 aa13.33□□□□□ -0.28
CDH11-202ENST00000394156 ZNF326Q5BKZ1 582 aaKnown RBP13.32□□□□□ -0.28
CDH11-202ENST00000394156 PLPPR3Q6T4P5 718 aa13.29□□□□□ -0.28
CDH11-202ENST00000394156 NEFLP07196 543 aa13.27□□□□□ -0.29
CDH11-202ENST00000394156 SENP3Q9H4L4 574 aaPredicted RBP13.25□□□□□ -0.29
CDH11-202ENST00000394156 BCANQ96GW7 911 aa13.22□□□□□ -0.29
CDH11-202ENST00000394156 DIEXFQ68CQ4 756 aaKnown RBP13.21□□□□□ -0.3
CDH11-202ENST00000394156 BCL11AQ9H165 835 aa13.2□□□□□ -0.3
CDH11-202ENST00000394156 ZNF777Q9ULD5 760 aaPredicted RBP13.18□□□□□ -0.3
CDH11-202ENST00000394156 MYO15BQ96JP2 1530 aa13.11□□□□□ -0.31
CDH11-202ENST00000394156 MYT1Q01538 1121 aa13.08□□□□□ -0.32
CDH11-202ENST00000394156 ZCCHC6Q5VYS8 1495 aaKnown RBP13.07□□□□□ -0.32
CDH11-202ENST00000394156 HIRIP3Q9BW71 556 aaPredicted RBP13.02□□□□□ -0.32
CDH11-202ENST00000394156 CHIC2Q9UKJ5 165 aa13.02□□□□□ -0.33
CDH11-202ENST00000394156 SENP3-EIF4A1A0A087X0R7 540 aa13.01□□□□□ -0.33
CDH11-202ENST00000394156 CSRNP3Q8WYN3 585 aa13.01□□□□□ -0.33
CDH11-202ENST00000394156 SLC24A1O60721 1099 aa13□□□□□ -0.33
CDH11-202ENST00000394156 GTF3C3Q9Y5Q9 886 aa12.96□□□□□ -0.34
CDH11-202ENST00000394156 CCDC180Q9P1Z9 1646 aa12.95□□□□□ -0.34
CDH11-202ENST00000394156 PLEKHG5O94827 1062 aa12.93□□□□□ -0.34
CDH11-202ENST00000394156 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.92□□□□□ -0.34
CDH11-202ENST00000394156 SALL2Q9Y467 1007 aaPredicted RBP12.92□□□□□ -0.34
CDH11-202ENST00000394156 CHGAP10645 457 aaKnown RBP12.91□□□□□ -0.34
CDH11-202ENST00000394156 CLSPNQ9HAW4 1339 aa12.86□□□□□ -0.35
CDH11-202ENST00000394156 DAXXQ9UER7 740 aaPredicted RBP12.84□□□□□ -0.35
CDH11-202ENST00000394156 ZNF316A6NFI3 1004 aaPredicted RBP12.82□□□□□ -0.36
CDH11-202ENST00000394156 KDM2AQ9Y2K7 1162 aa12.82□□□□□ -0.36
CDH11-202ENST00000394156 ANP32CO43423 234 aa12.82□□□□□ -0.36
CDH11-202ENST00000394156 KCNH8Q96L42 1107 aa12.79□□□□□ -0.36
CDH11-202ENST00000394156 DDX10Q13206 875 aaKnown RBP12.79□□□□□ -0.36
CDH11-202ENST00000394156 RRP7BPQ9NSQ0 103 aa12.77□□□□□ -0.37
CDH11-202ENST00000394156 RB1CC1Q8TDY2 1594 aa12.76□□□□□ -0.37
CDH11-202ENST00000394156 CECR2Q9BXF3 1484 aa12.75□□□□□ -0.37
CDH11-202ENST00000394156 FAM9BQ8IZU0 186 aa12.74□□□□□ -0.37
CDH11-202ENST00000394156 RSF1Q96T23 1441 aaPredicted RBP12.74□□□□□ -0.37
CDH11-202ENST00000394156 IRX6P78412 446 aaPredicted RBP12.74□□□□□ -0.37
CDH11-202ENST00000394156 CHMP7Q8WUX9 453 aaPredicted RBP12.73□□□□□ -0.37
CDH11-202ENST00000394156 STAG3Q9UJ98 1225 aa12.69□□□□□ -0.38
CDH11-202ENST00000394156 ABCC8Q09428 1581 aa12.69□□□□□ -0.38
CDH11-202ENST00000394156 NPM2Q86SE8 214 aaKnown RBP12.68□□□□□ -0.38
CDH11-202ENST00000394156 CANXP27824 592 aaKnown RBP12.66□□□□□ -0.38
CDH11-202ENST00000394156 DCAF1Q9Y4B6 1507 aa12.66□□□□□ -0.38
CDH11-202ENST00000394156 SCAF1Q9H7N4 1312 aaKnown RBP12.64□□□□□ -0.39
CDH11-202ENST00000394156 RGL3Q3MIN7 710 aa12.63□□□□□ -0.39
CDH11-202ENST00000394156 BAZ1BQ9UIG0 1483 aaKnown RBP12.63□□□□□ -0.39
CDH11-202ENST00000394156 ZBTB7CA1YPR0 619 aa12.63□□□□□ -0.39
CDH11-202ENST00000394156 TONSLQ96HA7 1378 aa12.62□□□□□ -0.39
CDH11-202ENST00000394156 FKBP8Q14318 412 aa12.62□□□□□ -0.39
CDH11-202ENST00000394156 WIZO95785 1651 aa12.62□□□□□ -0.39
CDH11-202ENST00000394156 MIER1Q8N108 512 aa12.61□□□□□ -0.39
CDH11-202ENST00000394156 ESF1Q9H501 851 aaKnown RBP12.6□□□□□ -0.39
CDH11-202ENST00000394156 HNRNPUQ00839 825 aaKnown RBP eCLIP12.6□□□□□ -0.39
CDH11-202ENST00000394156 CLIP1P30622 1438 aa12.59□□□□□ -0.39
CDH11-202ENST00000394156 MTUS2Q5JR59 1369 aa12.59□□□□□ -0.39
CDH11-202ENST00000394156 CEP162Q5TB80 1403 aa12.58□□□□□ -0.4
CDH11-202ENST00000394156 ACIN1Q9UKV3 1341 aaKnown RBP12.58□□□□□ -0.4
CDH11-202ENST00000394156 EIF4G1Q04637 1599 aaKnown RBP12.57□□□□□ -0.4
CDH11-202ENST00000394156 CDK11AQ9UQ88 783 aaPredicted RBP12.57□□□□□ -0.4
CDH11-202ENST00000394156 SOGA1O94964 1423 aa12.57□□□□□ -0.4
CDH11-202ENST00000394156 NPM1P06748 294 aaKnown RBP eCLIP12.57□□□□□ -0.4
CDH11-202ENST00000394156 SIN3AQ96ST3 1273 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms